At5g39660


Description : Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5]


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g39660
Cluster HCCA clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
29617 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
89924 No alias cycling DOF factor 1 0.02 Orthogroups_2024-Update
A4A49_12086 No alias cyclic dof factor 2 0.07 Orthogroups_2024-Update
Bradi2g09720 No alias cycling DOF factor 2 0.04 Orthogroups_2024-Update
Bradi3g51510 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Brara.B00052.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.C04204.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Brara.D00980.1 No alias transcription factor *(DOF) 0.08 Orthogroups_2024-Update
Brara.F01753.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.F02115.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.G01458.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.G02475.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.G02891.1 No alias transcription factor *(DOF) 0.06 Orthogroups_2024-Update
Brara.H02152.1 No alias transcription factor *(DOF) 0.07 Orthogroups_2024-Update
GRMZM2G042218 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.06G194800 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Glyma.10G173700 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Glyma.13G237500 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.17G101000 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
HORVU2Hr1G095390.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g15900 No alias expressed protein 0.04 Orthogroups_2024-Update
LOC_Os01g55340 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_97259g0020 No alias (at5g62430 : 134.0) Dof-type zinc finger... 0.04 Orthogroups_2024-Update
PSME_00028077-RA No alias (at5g39660 : 211.0) Dof-type zinc finger... 0.04 Orthogroups_2024-Update
PSME_00041316-RA No alias (at5g39660 : 139.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
Potri.004G038800 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
Potri.004G121800 No alias cycling DOF factor 2 0.05 Orthogroups_2024-Update
Potri.008G087800 No alias cycling DOF factor 2 0.04 Orthogroups_2024-Update
Potri.011G047500 No alias OBF binding protein 4 0.04 Orthogroups_2024-Update
Potri.017G084600 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Potri.019G040700 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Pp1s124_139V6 No alias zinc finger 0.04 Orthogroups_2024-Update
Seita.5G052700.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Seita.6G192200.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Sobic.001G078700.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Sobic.003G121400.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Sobic.009G014400.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Solyc02g067230 No alias Dof zinc finger protein3 0.05 Orthogroups_2024-Update
Solyc05g007880 No alias Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA) 0.06 Orthogroups_2024-Update
Solyc06g005130 No alias Dof zinc finger protein (AHRD V3.3 *** W9RMR9_9ROSA) 0.04 Orthogroups_2024-Update
Solyc10g086440 No alias Dof zinc finger protein (AHRD V3.3 *** W9S882_9ROSA) 0.04 Orthogroups_2024-Update
Sopen02g022800 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen06g026650 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
BP GO:0045116 protein neddylation IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 136 192
No external refs found!