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At5g41170


Description : Pentatricopeptide repeat-containing protein At5g41170, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLL3]


Gene families : OG_42_0000374 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g41170
Cluster HCCA clusters: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
A4A49_33758 No alias putative pentatricopeptide repeat-containing protein,... 0.03 Orthogroups_2024-Update
A4A49_42273 No alias putative pentatricopeptide repeat-containing protein,... 0.03 Orthogroups_2024-Update
At1g62720 No alias Pentatricopeptide repeat-containing protein At1g62720... 0.03 Orthogroups_2024-Update
Brara.K01813.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.09G174800 No alias ATP binding;nucleic acid binding;helicases 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 137 169
IPR002885 Pentatricopeptide_repeat 489 522
IPR002885 Pentatricopeptide_repeat 381 414
IPR002885 Pentatricopeptide_repeat 423 472
IPR002885 Pentatricopeptide_repeat 315 362
IPR002885 Pentatricopeptide_repeat 245 293
IPR002885 Pentatricopeptide_repeat 175 224
No external refs found!