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  5. At5g42400

At5g42400


Description : SET domain protein 25 [Source:TAIR;Acc:AT5G42400]


Gene families : OG_42_0005339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005339_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g42400
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
81880 No alias SET domain protein 25 0.02 Orthogroups_2024-Update
Bradi4g01790 No alias SET domain protein 25 0.07 Orthogroups_2024-Update
GRMZM2G473138 No alias SET domain protein 25 0.03 Orthogroups_2024-Update
Kfl00067_0030 kfl00067_0030_v1.1 (at5g42400 : 213.0) Encodes ATXR7 (ARABIDOPSIS... 0.05 Orthogroups_2024-Update
MA_18041g0010 No alias (at5g42400 : 334.0) Encodes ATXR7 (ARABIDOPSIS... 0.05 Orthogroups_2024-Update
Mp1g17790.1 No alias class III/Trithorax histone methyltransferase component... 0.02 Orthogroups_2024-Update
PSME_00002441-RA No alias (at5g42400 : 337.0) Encodes ATXR7 (ARABIDOPSIS... 0.03 Orthogroups_2024-Update
Pp1s101_4V6 No alias histone h3 methyltransferasesubunit set1 0.02 Orthogroups_2024-Update
Seita.3G394700.1 No alias class-III histone methyltransferase *(Trx) 0.04 Orthogroups_2024-Update
evm.model.contig_2108.6 No alias (at5g42400 : 123.0) Encodes ATXR7 (ARABIDOPSIS... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005801 cis-Golgi network IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
CC GO:0030677 ribonuclease P complex IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
CC GO:1902555 endoribonuclease complex IEP Predicted GO
CC GO:1905348 endonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001214 SET_dom 1261 1365
No external refs found!