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  5. At5g42840

At5g42840


Description : CHP-rich zinc finger protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FMN5]


Gene families : OG_42_0001129 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001129_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g42840
Cluster HCCA clusters: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
At3g27490 No alias Cysteine/Histidine-rich C1 domain family protein... 0.04 Orthogroups_2024-Update
At5g43030 No alias CHP-rich zinc finger protein-like... 0.06 Orthogroups_2024-Update
At5g44770 No alias CHP-rich zinc finger protein-like... 0.03 Orthogroups_2024-Update
At5g59940 No alias Cysteine/Histidine-rich C1 domain family protein... 0.04 Orthogroups_2024-Update
Glyma.19G148300 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
InterPro domains Description Start Stop
IPR004146 DC1 60 108
IPR004146 DC1 371 418
IPR004146 DC1 173 221
IPR004146 DC1 288 335
IPR004146 DC1 235 278
IPR004146 DC1 121 162
IPR004146 DC1 541 590
No external refs found!