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  5. At5g42940

At5g42940


Description : Probable E3 ubiquitin-protein ligase RHG1A [Source:UniProtKB/Swiss-Prot;Acc:Q9FMM4]


Gene families : OG_42_0000181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g42940
Cluster HCCA clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
A4A49_05648 No alias putative e3 ubiquitin-protein ligase hip1 0.02 Orthogroups_2024-Update
Bradi2g34660 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G076600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G049400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
MA_44267g0010 No alias (at2g15530 : 147.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00030521-RA No alias (at5g10650 : 105.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.006G274700 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.018G005600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Sobic.003G250400.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.009G221600.3 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sopen08g002410 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen10g022960 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 637 678
No external refs found!