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  5. At5g43040

At5g43040


Description : CHP-rich zinc finger protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FMI0]


Gene families : OG_42_0001129 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001129_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g43040
Cluster HCCA clusters: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
At3g46810 No alias Cysteine/Histidine-rich C1 domain family protein... 0.03 Orthogroups_2024-Update
At4g01920 No alias AT4g01920/T7B11_18 [Source:UniProtKB/TrEMBL;Acc:Q9SYI9] 0.03 Orthogroups_2024-Update
At4g02190 No alias Cysteine/Histidine-rich C1 domain family protein... 0.03 Orthogroups_2024-Update
At4g14980 No alias Cysteine/Histidine-rich C1 domain family protein... 0.04 Orthogroups_2024-Update
At5g54020 No alias Cysteine/Histidine-rich C1 domain family protein... 0.05 Orthogroups_2024-Update
At5g54050 No alias Cysteine/Histidine-rich C1 domain family protein... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004146 DC1 258 306
IPR004146 DC1 175 221
IPR004146 DC1 437 484
No external refs found!