Solyc03g116890

Description : WRKY transcription factor 39

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc03g116890
Cluster	HCCA clusters: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method
29146	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
81371	No alias	WRKY DNA-binding protein 9	0.02	Orthogroups_2024-Update
A4A49_10325	No alias	putative wrky transcription factor 40	0.04	Orthogroups_2024-Update
A4A49_12253	No alias	putative wrky transcription factor 71	0.03	Orthogroups_2024-Update
A4A49_19262	No alias	putative wrky transcription factor 40	0.06	Orthogroups_2024-Update
A4A49_19554	No alias	putative wrky transcription factor 70	0.05	Orthogroups_2024-Update
A4A49_26487	No alias	putative wrky transcription factor 65	0.04	Orthogroups_2024-Update
A4A49_40108	No alias	putative wrky transcription factor 51	0.03	Orthogroups_2024-Update
AC205562.3_FG002	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
AC209050.3_FG003	No alias	WRKY DNA-binding protein 40	0.04	Orthogroups_2024-Update
At1g18860	No alias	WRKY DNA-binding protein 61 [Source:TAIR;Acc:AT1G18860]	0.03	Orthogroups_2024-Update
At1g30650	No alias	Probable WRKY transcription factor 14...	0.03	Orthogroups_2024-Update
At1g69310	No alias	At1g69310 [Source:UniProtKB/TrEMBL;Acc:Q147N6]	0.03	Orthogroups_2024-Update
At1g69810	No alias	At1g69810 [Source:UniProtKB/TrEMBL;Acc:Q058I4]	0.04	Orthogroups_2024-Update
At1g80840	No alias	Probable WRKY transcription factor 40...	0.03	Orthogroups_2024-Update
At2g38470	No alias	WRKY33 [Source:UniProtKB/TrEMBL;Acc:A0A178VLS4]	0.02	Orthogroups_2024-Update
At4g18170	No alias	WRKY28 [Source:UniProtKB/TrEMBL;Acc:A0A178V3M3]	0.04	Orthogroups_2024-Update
At4g31800	No alias	WRKY like transcription factor...	0.03	Orthogroups_2024-Update
At5g46350	No alias	Probable WRKY transcription factor 8...	0.03	Orthogroups_2024-Update
Bradi1g30870	No alias	WRKY DNA-binding protein 18	0.04	Orthogroups_2024-Update
Bradi2g11170	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Bradi2g15877	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Bradi2g49906	No alias	WRKY DNA-binding protein 65	0.02	Orthogroups_2024-Update
Bradi4g30360	No alias	WRKY DNA-binding protein 40	0.03	Orthogroups_2024-Update
Bradi4g44342	No alias	WRKY DNA-binding protein 70	0.05	Orthogroups_2024-Update
Brara.A03925.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.B00003.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Brara.B01768.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B02409.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Brara.C02724.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Brara.C02964.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.D02346.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Brara.E00061.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E03626.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F02781.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F03852.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.G02914.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.H00940.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I00057.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I00414.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I01929.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I02227.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.I02900.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.I03880.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.K00205.1	No alias	WRKY-type transcription factor	0.06	Orthogroups_2024-Update
Brara.K00397.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.K01698.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
GRMZM2G012724	No alias	WRKY DNA-binding protein 33	0.04	Orthogroups_2024-Update
GRMZM2G025895	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G111711	No alias	WRKY DNA-binding protein 40	0.03	Orthogroups_2024-Update
GRMZM2G139815	No alias	WRKY DNA-binding protein 30	0.03	Orthogroups_2024-Update
GRMZM2G169966	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
GRMZM2G411766	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.01G043300	No alias	WRKY DNA-binding protein 72	0.03	Orthogroups_2024-Update
Glyma.01G128100	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
Glyma.03G220800	No alias	WRKY DNA-binding protein 23	0.03	Orthogroups_2024-Update
Glyma.05G029000	No alias	WRKY DNA-binding protein 72	0.04	Orthogroups_2024-Update
Glyma.05G160800	No alias	WRKY DNA-binding protein 65	0.03	Orthogroups_2024-Update
Glyma.06G061900	No alias	WRKY DNA-binding protein 40	0.03	Orthogroups_2024-Update
Glyma.06G190800	No alias	WRKY DNA-binding protein 72	0.02	Orthogroups_2024-Update
Glyma.07G023300	No alias	WRKY DNA-binding protein 40	0.04	Orthogroups_2024-Update
Glyma.07G227200	No alias	WRKY DNA-binding protein 3	0.03	Orthogroups_2024-Update
Glyma.08G078700	No alias	WRKY DNA-binding protein 14	0.04	Orthogroups_2024-Update
Glyma.08G320200	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.09G280200	No alias	WRKY DNA-binding protein 33	0.05	Orthogroups_2024-Update
Glyma.13G267500	No alias	WRKY DNA-binding protein 70	0.02	Orthogroups_2024-Update
Glyma.17G097900	No alias	WRKY DNA-binding protein 72	0.03	Orthogroups_2024-Update
Glyma.18G056600	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
Glyma.18G124700	No alias	WRKY DNA-binding protein 72	0.04	Orthogroups_2024-Update
HORVU3Hr1G069320.3	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
HORVU6Hr1G067680.3	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
LOC_Os01g53260	No alias	WRKY23, expressed	0.02	Orthogroups_2024-Update
LOC_Os01g60520	No alias	WRKY116, expressed	0.02	Orthogroups_2024-Update
LOC_Os02g43560	No alias	WRKY34, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g05380	No alias	WRKY73, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g44010	No alias	WRKY28, expressed	0.02	Orthogroups_2024-Update
LOC_Os07g02060	No alias	WRKY29, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g29660	No alias	WRKY69, expressed	0.03	Orthogroups_2024-Update
LOC_Os08g38990	No alias	WRKY30, expressed	0.02	Orthogroups_2024-Update
LOC_Os12g32250	No alias	WRKY96, expressed	0.02	Orthogroups_2024-Update
MA_10432362g0010	No alias	(at1g69310 : 113.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
MA_114793g0010	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
MA_124797g0010	No alias	(at1g29280 : 170.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
MA_23415g0010	No alias	(at5g26170 : 117.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
MA_91468g0010	No alias	(at4g01720 : 124.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
Mp8g10640.1	No alias	transcription factor (WRKY)	0.04	Orthogroups_2024-Update
PSME_00008606-RA	No alias	(at5g56270 : 338.0) WRKY transcription factor 2; WRKY...	0.03	Orthogroups_2024-Update
PSME_00021156-RA	No alias	no hits & (original description: no original description)	0.05	Orthogroups_2024-Update
PSME_00028886-RA	No alias	(at5g15130 : 207.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00033789-RA	No alias	(at2g38470 : 152.0) Member of the plant WRKY...	0.03	Orthogroups_2024-Update
PSME_00035159-RA	No alias	(at1g29860 : 115.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00035861-RA	No alias	(at3g01970 : 109.0) member of WRKY Transcription Factor;...	0.05	Orthogroups_2024-Update
PSME_00036209-RA	No alias	(at4g01720 : 157.0) member of WRKY Transcription Factor;...	0.05	Orthogroups_2024-Update
PSME_00036210-RA	No alias	(at1g62300 : 137.0) Encodes a transcription factor...	0.04	Orthogroups_2024-Update
PSME_00039003-RA	No alias	(at1g29860 : 112.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00040311-RA	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
PSME_00042021-RA	No alias	(at4g22070 : 263.0) member of WRKY Transcription Factor;...	0.05	Orthogroups_2024-Update
PSME_00047222-RA	No alias	(at4g04450 : 178.0) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
PSME_00048777-RA	No alias	(at4g23810 : 118.0) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
PSME_00051212-RA	No alias	(at4g11070 : 110.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00051522-RA	No alias	(at2g34830 : 207.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00052260-RA	No alias	(at5g26170 : 117.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
Potri.001G044500	No alias	WRKY DNA-binding protein 40	0.04	Orthogroups_2024-Update
Potri.001G092900	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Potri.001G352400	No alias	WRKY DNA-binding protein 28	0.03	Orthogroups_2024-Update
Potri.001G460600	No alias	WRKY DNA-binding protein 14	0.03	Orthogroups_2024-Update
Potri.002G193000	No alias	WRKY DNA-binding protein 23	0.05	Orthogroups_2024-Update
Potri.003G138600	No alias	WRKY family transcription factor	0.06	Orthogroups_2024-Update
Potri.004G007500	No alias	WRKY family transcription factor	0.05	Orthogroups_2024-Update
Potri.004G072000	No alias	WRKY DNA-binding protein 27	0.03	Orthogroups_2024-Update
Potri.005G085200	No alias	WRKY DNA-binding protein 51	0.04	Orthogroups_2024-Update
Potri.006G109100	No alias	WRKY DNA-binding protein 70	0.04	Orthogroups_2024-Update
Potri.011G007800	No alias	WRKY family transcription factor	0.05	Orthogroups_2024-Update
Potri.011G169300	No alias	WRKY DNA-binding protein 2	0.04	Orthogroups_2024-Update
Potri.014G111900	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Potri.014G118200	No alias	WRKY DNA-binding protein 23	0.03	Orthogroups_2024-Update
Potri.015G064100	No alias	WRKY DNA-binding protein 72	0.03	Orthogroups_2024-Update
Potri.015G099200	No alias	WRKY DNA-binding protein 75	0.06	Orthogroups_2024-Update
Potri.016G128300	No alias	WRKY DNA-binding protein 33	0.04	Orthogroups_2024-Update
Potri.016G137900	No alias	WRKY DNA-binding protein 70	0.03	Orthogroups_2024-Update
Potri.019G059300	No alias	WRKY DNA-binding protein 55	0.02	Orthogroups_2024-Update
Pp1s35_401V6	No alias	wrky transcription	0.03	Orthogroups_2024-Update
Pp1s39_217V6	No alias	wrky transcription	0.02	Orthogroups_2024-Update
Seita.1G062100.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Seita.2G206000.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.3G170400.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.4G197100.1	No alias	WRKY-type transcription factor	0.06	Orthogroups_2024-Update
Seita.5G001000.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G032600.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G132800.1	No alias	WRKY-type transcription factor	0.05	Orthogroups_2024-Update
Seita.7G302500.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Seita.8G088600.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.8G123100.1	No alias	WRKY-type transcription factor	0.06	Orthogroups_2024-Update
Seita.9G413200.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G421700.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.001G389000.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.002G174300.1	No alias	WRKY-type transcription factor	0.05	Orthogroups_2024-Update
Sobic.003G037500.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G200700.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.003G276000.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.003G285500.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.003G341100.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.004G065900.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.005G013600.2	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.005G117400.2	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.007G118301.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.009G068900.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.009G100500.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G171600.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.05	Orthogroups_2024-Update
Sobic.009G206800.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.010G209100.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G209200.1	No alias	WRKY-type transcription factor	0.05	Orthogroups_2024-Update
Solyc03g007380	No alias	WRKY transcription factor 52	0.03	Orthogroups_2024-Update
Solyc04g051690	No alias	WRKY transcription factor 51	0.04	Orthogroups_2024-Update
Solyc04g072070	No alias	WRKY transcription factor 55	0.04	Orthogroups_2024-Update
Solyc06g048870	No alias	WRKY transcription factor 19	0.03	Orthogroups_2024-Update
Solyc07g047960	No alias	WRKY transcription factor 1	0.04	Orthogroups_2024-Update
Solyc08g067360	No alias	WRKY transcription factor 45	0.05	Orthogroups_2024-Update
Solyc09g014990	No alias	WRKY transcription factor 33	0.03	Orthogroups_2024-Update
Solyc10g011910	No alias	WRKY transcription factor 25	0.05	Orthogroups_2024-Update
Solyc12g014610	No alias	WRKY transcription factor 20	0.03	Orthogroups_2024-Update
Sopen05g011470	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update
Sopen08g004130	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004568	chitinase activity	IEP	Predicted GO
MF	GO:0004649	poly(ADP-ribose) glycohydrolase activity	IEP	Predicted GO
BP	GO:0006022	aminoglycan metabolic process	IEP	Predicted GO
BP	GO:0006026	aminoglycan catabolic process	IEP	Predicted GO
BP	GO:0006030	chitin metabolic process	IEP	Predicted GO
BP	GO:0006032	chitin catabolic process	IEP	Predicted GO
BP	GO:0006040	amino sugar metabolic process	IEP	Predicted GO
MF	GO:0008061	chitin binding	IEP	Predicted GO
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Predicted GO
BP	GO:0042737	drug catabolic process	IEP	Predicted GO
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Predicted GO
BP	GO:0046348	amino sugar catabolic process	IEP	Predicted GO
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Predicted GO
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	172	229

External Links

No external refs found!

Solyc03g116890

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation