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  5. At5g44500

At5g44500


Description : Small nuclear ribonucleoprotein-associated protein [Source:UniProtKB/TrEMBL;Acc:Q9FI15]


Gene families : OG_42_0004412 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004412_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g44500
Cluster HCCA clusters: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
A4A49_26289 No alias hypothetical protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G056750.1 No alias component *(Sm-B) of U1/U2/U4/U5-associated Sm accessory... 0.02 Orthogroups_2024-Update
Sopen01g038350 No alias LSM domain 0.04 Orthogroups_2024-Update
Sopen05g028310 No alias LSM domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006788 heme oxidation IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 9 84
No external refs found!