At5g46590

Description : NAC domain-containing protein 96 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS24]

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At5g46590
Cluster	HCCA clusters: Cluster_233

Target	Alias	Description	ECC score	Gene Family Method
A4A49_58267	No alias	hypothetical protein	0.03	Orthogroups_2024-Update
At1g54330	No alias	NAC domain containing protein 20...	0.04	Orthogroups_2024-Update
At1g62700	No alias	NAC domain-containing protein 26...	0.04	Orthogroups_2024-Update
At3g18400	No alias	NAC domain containing protein 58...	0.04	Orthogroups_2024-Update
At5g53950	No alias	Protein CUP-SHAPED COTYLEDON 2...	0.04	Orthogroups_2024-Update
Bradi3g33957	No alias	NAC domain containing protein 71	0.02	Orthogroups_2024-Update
Brara.A00921.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.A03837.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B02268.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.D01471.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
GRMZM2G082709	No alias	NAC domain containing protein 71	0.03	Orthogroups_2024-Update
GRMZM2G176677	No alias	NAC domain containing protein 82	0.04	Orthogroups_2024-Update
Glyma.04G167200	No alias	NAC domain containing protein 100	0.02	Orthogroups_2024-Update
Glyma.16G152100	No alias	Arabidopsis NAC domain containing protein 87	0.03	Orthogroups_2024-Update
PSME_00004284-RA	No alias	(at4g10350 : 304.0) NAC domain protein. SMB, BRN1, and...	0.03	Orthogroups_2024-Update
PSME_00014399-RA	No alias	(at5g53950 : 274.0) Transcriptional activator of the NAC...	0.03	Orthogroups_2024-Update
PSME_00049694-RA	No alias	(at2g18060 : 259.0) Encodes a NAC-domain transcription...	0.02	Orthogroups_2024-Update
Potri.001G144400	No alias	NAC domain containing protein 96	0.05	Orthogroups_2024-Update
Potri.001G448400	No alias	NAC (No Apical Meristem) domain transcriptional...	0.04	Orthogroups_2024-Update
Potri.011G153300	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Potri.015G030200	No alias	NAC domain containing protein 57	0.04	Orthogroups_2024-Update
Potri.017G139500	No alias	NAC domain containing protein 28	0.03	Orthogroups_2024-Update
Pp1s10_90V6	No alias	nac domain ipr003441	0.02	Orthogroups_2024-Update
Solyc06g065410	No alias	NAC domain-containing protein, putative (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc06g074170	No alias	NAC domain protein, (AHRD V3.3 *** A0A061GVZ7_THECC)	0.03	Orthogroups_2024-Update
Solyc08g008660	No alias	NAC domain-containing protein, putative (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005086	ARF guanyl-nucleotide exchange factor activity	IEP	Predicted GO
BP	GO:0007010	cytoskeleton organization	IEP	Predicted GO
BP	GO:0009966	regulation of signal transduction	IEP	Predicted GO
BP	GO:0010646	regulation of cell communication	IEP	Predicted GO
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Predicted GO
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Predicted GO
BP	GO:0023051	regulation of signaling	IEP	Predicted GO
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	Predicted GO
BP	GO:0042254	ribosome biogenesis	IEP	Predicted GO
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	Predicted GO
BP	GO:0048583	regulation of response to stimulus	IEP	Predicted GO
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	Predicted GO
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	7	134

External Links

No external refs found!

At5g46590

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation