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  5. At5g47450

At5g47450


Description : Aquaporin TIP2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGL2]


Gene families : OG_42_0000183 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g47450
Cluster HCCA clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
A4A49_42579 No alias putative aquaporin tip3-2 0.02 Orthogroups_2024-Update
At1g52180 No alias Aquaporin, putative [Source:UniProtKB/TrEMBL;Acc:Q9M818] 0.04 Orthogroups_2024-Update
Glyma.10G290600 No alias tonoplast intrinsic protein 1;3 0.04 Orthogroups_2024-Update
Glyma.16G210000 No alias Aquaporin-like superfamily protein 0.03 Orthogroups_2024-Update
PSME_00018521-RA No alias (at2g36830 : 324.0) Encodes a tonoplast intrinsic... 0.03 Orthogroups_2024-Update
PSME_00026675-RA No alias (at2g36830 : 254.0) Encodes a tonoplast intrinsic... 0.03 Orthogroups_2024-Update
Sobic.009G085900.1 No alias tonoplast intrinsic protein *(TIP) 0.02 Orthogroups_2024-Update
Solyc08g066840 No alias tonoplast intrinsic protein 4.1 0.02 Orthogroups_2024-Update
Sopen12g022600 No alias Major intrinsic protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000425 MIP 14 232
No external refs found!