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  5. Solyc03g117420

Solyc03g117420


Description : F-box/LRR-repeat protein (AHRD V3.3 *** A0A0K9PK37_ZOSMR)


Gene families : OG_42_0003322 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003322_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g117420
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Brara.F01079.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Pp1s287_25V6 No alias f-box-containing protein 1 0.03 Orthogroups_2024-Update
Seita.1G231400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G138400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen07g003470 No alias Leucine Rich repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0004325 ferrochelatase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006470 protein dephosphorylation IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0009893 positive regulation of metabolic process IEP Predicted GO
BP GO:0009894 regulation of catabolic process IEP Predicted GO
BP GO:0009896 positive regulation of catabolic process IEP Predicted GO
BP GO:0010506 regulation of autophagy IEP Predicted GO
BP GO:0010508 positive regulation of autophagy IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
BP GO:0031325 positive regulation of cellular metabolic process IEP Predicted GO
BP GO:0031329 regulation of cellular catabolic process IEP Predicted GO
BP GO:0031331 positive regulation of cellular catabolic process IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048522 positive regulation of cellular process IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 481 497
IPR001611 Leu-rich_rpt 230 251
IPR001611 Leu-rich_rpt 154 176
IPR001611 Leu-rich_rpt 131 151
IPR001611 Leu-rich_rpt 409 430
IPR001611 Leu-rich_rpt 433 454
IPR001611 Leu-rich_rpt 337 356
IPR001611 Leu-rich_rpt 385 406
IPR001611 Leu-rich_rpt 530 588
No external refs found!