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  5. At5g48560

At5g48560


Description : Transcription factor bHLH78 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJL4]


Gene families : OG_42_0000125 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g48560
Cluster HCCA clusters: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
A4A49_37228 No alias transcription factor hbi1 0.05 Orthogroups_2024-Update
Bradi3g41510 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G086800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os03g58830 No alias BEE 1, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g29830 No alias helix-loop-helix DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00000014-RA No alias (at1g68920 : 227.0) basic helix-loop-helix (bHLH)... 0.03 Orthogroups_2024-Update
Pp1s226_51V6 No alias dna binding 0.02 Orthogroups_2024-Update
Pp1s377_42V6 No alias T6L1.10; basic helix-loop-helix (bHLH) family protein... 0.03 Orthogroups_2024-Update
Sobic.007G224200.3 No alias regulatory protein (CIB) of blue light perception &... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006471 protein ADP-ribosylation IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 311 358
No external refs found!