Description : Probable pectate lyase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q93WF1]
Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Arabidopsis release: At5g48900 | |
Cluster | HCCA clusters: Cluster_79 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_12542 | No alias | pectate lyase | 0.03 | Orthogroups_2024-Update | |
A4A49_59737 | No alias | putative pectate lyase 18 | 0.03 | Orthogroups_2024-Update | |
Glyma.08G356800 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.18G255900 | No alias | Pectate lyase family protein | 0.03 | Orthogroups_2024-Update | |
HORVU2Hr1G002880.2 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.03 | Orthogroups_2024-Update | |
PSME_00017513-RA | No alias | (at4g24780 : 555.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
PSME_00019824-RA | No alias | (at1g67750 : 587.0) Pectate lyase family protein;... | 0.04 | Orthogroups_2024-Update | |
PSME_00043773-RA | No alias | (at1g67750 : 590.0) Pectate lyase family protein;... | 0.03 | Orthogroups_2024-Update | |
Potri.008G182200 | No alias | Pectate lyase family protein | 0.03 | Orthogroups_2024-Update | |
Potri.015G087800 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Sopen01g006390 | No alias | Pectate lyase | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Predicted GO |
MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Predicted GO |
MF | GO:0004602 | glutathione peroxidase activity | IEP | Predicted GO |
MF | GO:0004672 | protein kinase activity | IEP | Predicted GO |
BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Predicted GO |
BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Predicted GO |
BP | GO:0006468 | protein phosphorylation | IEP | Predicted GO |
BP | GO:0006629 | lipid metabolic process | IEP | Predicted GO |
BP | GO:0006644 | phospholipid metabolic process | IEP | Predicted GO |
BP | GO:0006650 | glycerophospholipid metabolic process | IEP | Predicted GO |
BP | GO:0006793 | phosphorus metabolic process | IEP | Predicted GO |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0007165 | signal transduction | IEP | Predicted GO |
BP | GO:0009309 | amine biosynthetic process | IEP | Predicted GO |
MF | GO:0009975 | cyclase activity | IEP | Predicted GO |
MF | GO:0009976 | tocopherol cyclase activity | IEP | Predicted GO |
MF | GO:0016301 | kinase activity | IEP | Predicted GO |
MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Predicted GO |
BP | GO:0016310 | phosphorylation | IEP | Predicted GO |
MF | GO:0016740 | transferase activity | IEP | Predicted GO |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Predicted GO |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Predicted GO |
MF | GO:0030410 | nicotianamine synthase activity | IEP | Predicted GO |
BP | GO:0030417 | nicotianamine metabolic process | IEP | Predicted GO |
BP | GO:0030418 | nicotianamine biosynthetic process | IEP | Predicted GO |
BP | GO:0042401 | cellular biogenic amine biosynthetic process | IEP | Predicted GO |
BP | GO:0046486 | glycerolipid metabolic process | IEP | Predicted GO |
BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | Predicted GO |
BP | GO:0046834 | lipid phosphorylation | IEP | Predicted GO |
BP | GO:0046854 | phosphatidylinositol phosphorylation | IEP | Predicted GO |
BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | Predicted GO |
BP | GO:0072351 | tricarboxylic acid biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002022 | Pec_lyase | 151 | 332 |
No external refs found! |