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  5. At5g50250

At5g50250


Description : RNA-binding protein CP31B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FGS0]


Gene families : OG_42_0004215 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004215_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g50250
Cluster HCCA clusters: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
Bradi3g42700 No alias 31-kDa RNA binding protein 0.03 Orthogroups_2024-Update
GRMZM2G011129 No alias 31-kDa RNA binding protein 0.02 Orthogroups_2024-Update
GRMZM2G158462 No alias 31-kDa RNA binding protein 0.07 Orthogroups_2024-Update
Glyma.04G190100 No alias 31-kDa RNA binding protein 0.03 Orthogroups_2024-Update
Glyma.05G043200 No alias chloroplast RNA-binding protein 31B 0.03 Orthogroups_2024-Update
Glyma.06G175400 No alias 31-kDa RNA binding protein 0.04 Orthogroups_2024-Update
Glyma.17G125700 No alias 31-kDa RNA binding protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004399 histidinol dehydrogenase activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
MF GO:0004817 cysteine-tRNA ligase activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0008837 diaminopimelate epimerase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
MF GO:0047661 amino-acid racemase activity IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
MF GO:0070567 cytidylyltransferase activity IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 115 184
IPR000504 RRM_dom 209 279
No external refs found!