At5g50390


Description : Pentatricopeptide repeat-containing protein At5g50390, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FK33]


Gene families : OG_42_0009809 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009809_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g50390
Cluster HCCA clusters: Cluster_108


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005801 cis-Golgi network IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR032867 DYW_dom 564 691
IPR002885 Pentatricopeptide_repeat 265 288
IPR002885 Pentatricopeptide_repeat 190 217
IPR002885 Pentatricopeptide_repeat 162 188
IPR002885 Pentatricopeptide_repeat 389 437
IPR002885 Pentatricopeptide_repeat 289 333
No external refs found!