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  5. At5g50570

At5g50570


Description : Squamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g50570
Cluster HCCA clusters: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Brara.F03810.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Brara.H02059.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Cre01.g012200 No alias squamosa promoter-binding protein-like 12 0.01 Orthogroups_2024-Update
Cre07.g335150 No alias squamosa promoter binding protein-like 4 0.01 Orthogroups_2024-Update
Cre16.g686100 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.01 Orthogroups_2024-Update
GRMZM2G160917 No alias squamosa promoter binding protein-like 9 0.02 Orthogroups_2024-Update
Glyma.11G163828 No alias squamosa promoter binding protein-like 9 0.03 Orthogroups_2024-Update
Glyma.13G274900 No alias squamosa promoter-binding protein-like 12 0.03 Orthogroups_2024-Update
Glyma.19G094000 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
HORVU0Hr1G020810.1 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00051919-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.001G055900 No alias squamosa promoter binding protein-like 2 0.04 Orthogroups_2024-Update
Potri.003G172600 No alias squamosa promoter binding protein-like 2 0.03 Orthogroups_2024-Update
Potri.008G097900 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.04 Orthogroups_2024-Update
Seita.7G190000.1 No alias SBP-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.010G254200.2 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Solyc02g077920 No alias Colorless non-ripening 0.06 Orthogroups_2024-Update
Sopen05g011450 No alias SBP domain 0.03 Orthogroups_2024-Update
Sopen10g029320 No alias SBP domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004594 pantothenate kinase activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
BP GO:0008535 respiratory chain complex IV assembly IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0015937 coenzyme A biosynthetic process IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Predicted GO
BP GO:0033617 mitochondrial respiratory chain complex IV assembly IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predicted GO
CC GO:0034998 oligosaccharyltransferase I complex IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
InterPro domains Description Start Stop
IPR004333 SBP_dom 101 174
No external refs found!