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  5. Solyc03g117770

Solyc03g117770


Description : Serinc-domain containing serine and sphingolipid biosynthesis protein (AHRD V3.3 *** AT1G16180.2)


Gene families : OG_42_0003708 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003708_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g117770
Cluster HCCA clusters: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
A4A49_06674 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sobic.004G327300.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0004129 cytochrome-c oxidase activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0015002 heme-copper terminal oxidase activity IEP Predicted GO
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predicted GO
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR005016 TDE1/TMS 9 412
No external refs found!