At5g51860

Description : MADS-box protein AGL72 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLH5]

Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At5g51860

Target	Alias	Description	ECC score	Gene Family Method
121275	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
A4A49_10096	No alias	mads-box protein soc1	0.04	Orthogroups_2024-Update
A4A49_14235	No alias	developmental protein sepallata 1	0.02	Orthogroups_2024-Update
A4A49_18078	No alias	developmental protein sepallata 1	0.06	Orthogroups_2024-Update
A4A49_18989	No alias	agamous-like mads-box protein agl19	0.02	Orthogroups_2024-Update
A4A49_22632	No alias	floral homeotic protein agamous	0.02	Orthogroups_2024-Update
A4A49_27621	No alias	agamous-like mads-box protein agl9	0.02	Orthogroups_2024-Update
A4A49_29655	No alias	floral homeotic protein globosa	0.06	Orthogroups_2024-Update
At1g01530	No alias	AGL28 [Source:UniProtKB/TrEMBL;Acc:A0A178WE04]	0.03	Orthogroups_2024-Update
At1g69120	No alias	AP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W846]	0.05	Orthogroups_2024-Update
At2g24840	No alias	Agamous-like MADS-box protein AGL61...	0.03	Orthogroups_2024-Update
Bradi2g59191	No alias	AGAMOUS-like 19	0.05	Orthogroups_2024-Update
Bradi3g32090	No alias	AGAMOUS-like 20	0.06	Orthogroups_2024-Update
Bradi3g46920	No alias	AGAMOUS-like 16	0.05	Orthogroups_2024-Update
Bradi4g34680	No alias	K-box region and MADS-box transcription factor family protein	0.02	Orthogroups_2024-Update
Brara.J00749.1	No alias	MADS/AGL-type transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G026223	No alias	AGAMOUS-like 20	0.02	Orthogroups_2024-Update
GRMZM2G099577	No alias	AGAMOUS-like 62	0.05	Orthogroups_2024-Update
GRMZM2G133568	No alias	AGAMOUS-like 16	0.04	Orthogroups_2024-Update
GRMZM2G171365	No alias	AGAMOUS-like 20	0.02	Orthogroups_2024-Update
Glyma.01G064100	No alias	K-box region and MADS-box transcription factor family protein	0.04	Orthogroups_2024-Update
Glyma.03G019300	No alias	AGAMOUS-like 20	0.03	Orthogroups_2024-Update
Glyma.07G080900	No alias	AGAMOUS-like 20	0.11	Orthogroups_2024-Update
Glyma.09G283800	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Glyma.10G084700	No alias	AGAMOUS-like 62	0.02	Orthogroups_2024-Update
Glyma.10G085600	No alias	AGAMOUS-like 62	0.02	Orthogroups_2024-Update
Glyma.13G034100	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Glyma.13G052700	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Glyma.15G059600	No alias	AGAMOUS-like 21	0.04	Orthogroups_2024-Update
Glyma.15G088600	No alias	K-box region and MADS-box transcription factor family protein	0.04	Orthogroups_2024-Update
Glyma.20G136600	No alias	AGAMOUS-like 62	0.03	Orthogroups_2024-Update
HORVU0Hr1G003020.3	No alias	regulatory protein *(AP1/CAL/FUL) of floral meristem...	0.02	Orthogroups_2024-Update
HORVU1Hr1G008300.3	No alias	MADS/AGL-type transcription factor	0.04	Orthogroups_2024-Update
HORVU5Hr1G110470.1	No alias	MADS/AGL-type transcription factor	0.06	Orthogroups_2024-Update
HORVU6Hr1G002270.1	No alias	MADS/AGL-type transcription factor	0.09	Orthogroups_2024-Update
LOC_Os04g38770	No alias	OsMADS61 - MADS-box family gene with MIKCc type-box, expressed	0.04	Orthogroups_2024-Update
MA_211156g0010	No alias	(q40885\|ag_pethy : 164.0) Floral homeotic protein...	0.02	Orthogroups_2024-Update
PSME_00017701-RA	No alias	(at4g16370 : 263.0) Encodes an oligopeptide transporter...	0.02	Orthogroups_2024-Update
Potri.002G151700	No alias	AGAMOUS-like 20	0.03	Orthogroups_2024-Update
Potri.004G002400	No alias	AGAMOUS-like 62	0.03	Orthogroups_2024-Update
Potri.005G150501	No alias	AGAMOUS-like 16	0.03	Orthogroups_2024-Update
Pp1s163_73V6	No alias	mikc* mads-box transcription factor	0.03	Orthogroups_2024-Update
Pp1s267_56V6	No alias	agamous-like protein	0.04	Orthogroups_2024-Update
Seita.1G308200.1	No alias	MADS/AGL-type transcription factor	0.05	Orthogroups_2024-Update
Seita.6G223700.1	No alias	MADS/AGL-type transcription factor	0.06	Orthogroups_2024-Update
Solyc01g060300	No alias	damaged DNA binding 2 (AHRD V3.3 --* AT5G58760.2)	0.04	Orthogroups_2024-Update
Solyc01g093960	No alias	MADS-box transcription factor (AHRD V3.3 *** A0A072TNM9_MEDTR)	0.02	Orthogroups_2024-Update
Solyc01g106170	No alias	AGAMOUS-like MADS-box transcription factor (AHRD V3.3...	0.02	Orthogroups_2024-Update
Solyc02g071730	No alias	Tomato AGAMOUS 1	0.03	Orthogroups_2024-Update
Solyc06g059970	No alias	TPI	0.04	Orthogroups_2024-Update
Solyc08g067230	No alias	MADS box transcription factor (AHRD V3.3 *** G3EIU8_9SOLA)	0.05	Orthogroups_2024-Update
Sopen02g034000	No alias	K-box region	0.04	Orthogroups_2024-Update
Sopen03g033910	No alias	K-box region	0.02	Orthogroups_2024-Update
Sopen06g026710	No alias	K-box region	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Predicted GO
MF	GO:0004252	serine-type endopeptidase activity	IEP	Predicted GO
MF	GO:0005216	ion channel activity	IEP	Predicted GO
MF	GO:0008236	serine-type peptidase activity	IEP	Predicted GO
MF	GO:0015267	channel activity	IEP	Predicted GO
MF	GO:0017171	serine hydrolase activity	IEP	Predicted GO
MF	GO:0022803	passive transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022838	substrate-specific channel activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002487	TF_Kbox	89	170
IPR002100	TF_MADSbox	10	57

External Links

No external refs found!

At5g51860

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation