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  5. Solyc03g117860

Solyc03g117860


Description : RING/U-box superfamily protein (AHRD V3.3 *-* AT3G14250.1)


Gene families : OG_42_0000330 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g117860
Cluster HCCA clusters: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
415256 No alias zinc finger (C3HC4-type RING finger) family protein 0.02 Orthogroups_2024-Update
A4A49_40485 No alias putative e3 ubiquitin-protein ligase ari8 0.05 Orthogroups_2024-Update
At2g25370 No alias RBR-type E3 ubiquitin transferase... 0.03 Orthogroups_2024-Update
At2g26130 No alias RBR-type E3 ubiquitin transferase... 0.04 Orthogroups_2024-Update
At3g45510 No alias RBR-type E3 ubiquitin transferase... 0.02 Orthogroups_2024-Update
At3g45540 No alias RBR-type E3 ubiquitin transferase... 0.03 Orthogroups_2024-Update
Glyma.12G071900 No alias zinc finger (C3HC4-type RING finger) family protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G121290.2 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00042941-RA No alias (at3g53690 : 177.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00044035-RA No alias (at3g14250 : 157.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Sobic.002G126100.1 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP Predicted GO
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006570 tyrosine metabolic process IEP Predicted GO
BP GO:0006571 tyrosine biosynthetic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR002867 IBR_dom 31 95
IPR002867 IBR_dom 113 163
No external refs found!