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  5. At5g52260

At5g52260


Description : MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LTJ5]


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g52260
Cluster HCCA clusters: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
A4A49_01152 No alias transcription factor myb36 0.04 Orthogroups_2024-Update
A4A49_08715 No alias myb-related protein pp2 0.03 Orthogroups_2024-Update
A4A49_19591 No alias myb-related protein myb4 0.03 Orthogroups_2024-Update
A4A49_26801 No alias transcription factor myb3 0.03 Orthogroups_2024-Update
A4A49_28222 No alias transcription factor rax3 0.03 Orthogroups_2024-Update
A4A49_31893 No alias transcription factor myb36 0.04 Orthogroups_2024-Update
A4A49_31933 No alias transcription factor myb86 0.02 Orthogroups_2024-Update
A4A49_34201 No alias transcription factor myb82 0.03 Orthogroups_2024-Update
At4g13480 No alias Myb domain protein 79 [Source:UniProtKB/TrEMBL;Acc:Q9T0G9] 0.04 Orthogroups_2024-Update
At5g56110 No alias MYB80 [Source:UniProtKB/TrEMBL;Acc:A0A178UM75] 0.04 Orthogroups_2024-Update
Bradi1g64687 No alias myb domain protein 12 0.03 Orthogroups_2024-Update
Bradi2g24400 No alias myb domain protein 6 0.03 Orthogroups_2024-Update
Bradi3g49190 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Bradi4g22637 No alias myb domain protein 94 0.02 Orthogroups_2024-Update
Bradi4g29796 No alias myb domain protein 20 0.03 Orthogroups_2024-Update
Bradi4g38965 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
Bradi5g20130 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Brara.B01779.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.C03910.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Brara.D01054.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.03 Orthogroups_2024-Update
Brara.E03277.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
Brara.I00299.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.I00351.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G097636 No alias myb domain protein 63 0.02 Orthogroups_2024-Update
GRMZM2G159547 No alias myb domain protein 93 0.02 Orthogroups_2024-Update
GRMZM2G496770 No alias myb domain protein 19 0.03 Orthogroups_2024-Update
Glyma.02G110200 No alias myb domain protein 16 0.03 Orthogroups_2024-Update
Glyma.05G027000 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Glyma.06G193600 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Glyma.06G300400 No alias myb domain protein 74 0.03 Orthogroups_2024-Update
Glyma.09G235600 No alias myb domain protein 106 0.03 Orthogroups_2024-Update
Glyma.10G014600 No alias myb domain protein 12 0.03 Orthogroups_2024-Update
Glyma.11G194100 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Glyma.12G104800 No alias myb domain protein 14 0.04 Orthogroups_2024-Update
Glyma.13G066600 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.16G063700 No alias myb domain protein 40 0.03 Orthogroups_2024-Update
Glyma.17G158000 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Glyma.20G032900 No alias myb domain protein 106 0.03 Orthogroups_2024-Update
LOC_Os01g36460 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g19120 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g15020 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_81763g0010 No alias (at4g38620 : 242.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
MA_96853g0010 No alias (p93417|gam1_orysa : 259.0) Transcription factor GAMYB... 0.02 Orthogroups_2024-Update
Mp3g07510.1 No alias transcription factor (MYB) 0.02 Orthogroups_2024-Update
PSME_00010370-RA No alias (at5g62470 : 192.0) Encodes a R2R3 type Myb... 0.03 Orthogroups_2024-Update
PSME_00014640-RA No alias (at3g27810 : 179.0) Encodes a member of the R2R3-MYB... 0.03 Orthogroups_2024-Update
PSME_00020880-RA No alias (at1g66230 : 247.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00021445-RA No alias (at1g22640 : 169.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00022392-RA No alias (at3g13540 : 238.0) Encodes a member of the MYB family... 0.02 Orthogroups_2024-Update
PSME_00035534-RA No alias (at5g12870 : 162.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00040054-RA No alias (at3g13890 : 229.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00041772-RA No alias (at5g15310 : 261.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00042064-RA No alias (p20026|myb1_horvu : 274.0) Myb-related protein Hv1 -... 0.01 Orthogroups_2024-Update
PSME_00043807-RA No alias (at1g09540 : 265.0) Encodes putative transcription... 0.03 Orthogroups_2024-Update
PSME_00045716-RA No alias (at5g15310 : 288.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00049306-RA No alias (at5g15310 : 258.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00051224-RA No alias (at5g15310 : 212.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.03 Orthogroups_2024-Update
PSME_00052005-RA No alias (at3g02940 : 213.0) Encodes a putative transcription... 0.05 Orthogroups_2024-Update
PSME_00053285-RA No alias (at4g38620 : 263.0) Encodes a R2R3 MYB protein which is... 0.01 Orthogroups_2024-Update
Potri.003G094200 No alias myb domain protein 9 0.03 Orthogroups_2024-Update
Potri.014G100800 No alias myb domain protein 7 0.02 Orthogroups_2024-Update
Potri.019G118700 No alias myb domain protein 9 0.03 Orthogroups_2024-Update
Pp1s189_29V6 No alias myb55 (myb domain protein 55) dna binding transcription factor 0.02 Orthogroups_2024-Update
Pp1s371_6V6 No alias myb transcription factor myb92 0.02 Orthogroups_2024-Update
Pp1s46_302V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.1G250600.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.02 Orthogroups_2024-Update
Seita.3G055800.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.05 Orthogroups_2024-Update
Seita.7G132600.1 No alias transcriptional regulator *(MS188) & transcriptional... 0.03 Orthogroups_2024-Update
Seita.7G179800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G373000.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G273800.1 No alias MYB class-R2R3 subgroup-3 transcription factor 0.01 Orthogroups_2024-Update
Sobic.008G020300.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G131400.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G036500.3 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
Solyc02g067340 No alias R2R3MYB transcription factor 96 0.03 Orthogroups_2024-Update
Solyc03g059200 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRF2_SALMI) 0.03 Orthogroups_2024-Update
Solyc11g069030 No alias blind 0.04 Orthogroups_2024-Update
Sopen01g001670 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen06g031320 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen09g003070 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen10g025190 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
BP GO:0019310 inositol catabolic process IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044275 cellular carbohydrate catabolic process IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050113 inositol oxygenase activity IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 112
No external refs found!