1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g117870

Solyc03g117870


Description : 4-coumarate--CoA ligase


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g117870
Cluster HCCA clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
A4A49_10638 No alias 4-coumarate--coa ligase 2 0.04 Orthogroups_2024-Update
A4A49_40482 No alias 4-coumarate--coa ligase 1 0.05 Orthogroups_2024-Update
A4A49_41306 No alias 4-coumarate--coa ligase 2 0.09 Orthogroups_2024-Update
At1g20500 No alias 4-coumarate--CoA ligase-like 4... 0.02 Orthogroups_2024-Update
At1g20510 No alias 4-coumarate--CoA ligase-like 5... 0.03 Orthogroups_2024-Update
At1g65060 No alias 4-coumarate--CoA ligase 3... 0.03 Orthogroups_2024-Update
At5g63380 No alias 4-coumarate--CoA ligase-like 9... 0.08 Orthogroups_2024-Update
Bradi2g57860 No alias AMP-dependent synthetase and ligase family protein 0.04 Orthogroups_2024-Update
Bradi3g52350 No alias 4-coumarate:CoA ligase 3 0.04 Orthogroups_2024-Update
Bradi4g19947 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
Brara.H02326.1 No alias OPC-8 0.03 Orthogroups_2024-Update
Glyma.01G232400 No alias 4-coumarate:CoA ligase 3 0.03 Orthogroups_2024-Update
Glyma.13G372000 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
Glyma.17G064600 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
Glyma.18G076900 No alias acyl-CoA synthetase 5 0.03 Orthogroups_2024-Update
HORVU0Hr1G018190.6 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G089000.2 No alias Unknown function 0.06 Orthogroups_2024-Update
LOC_Os02g08100 No alias AMP-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g46970 No alias AMP-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g05780 No alias 4-coumarate--CoA ligase-like 7, putative, expressed 0.04 Orthogroups_2024-Update
MA_10430515g0010 No alias (at1g20510 : 564.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
MA_10432069g0020 No alias (at1g20510 : 391.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.04 Orthogroups_2024-Update
MA_5g0010 No alias (at4g05160 : 365.0) Encodes a peroxisomal protein... 0.02 Orthogroups_2024-Update
MA_70509g0010 No alias (o24146|4cl2_tobac : 763.0) 4-coumarate--CoA ligase 2... 0.03 Orthogroups_2024-Update
PSME_00015568-RA No alias (o24146|4cl2_tobac : 707.0) 4-coumarate--CoA ligase 2... 0.03 Orthogroups_2024-Update
PSME_00015569-RA No alias (o24146|4cl2_tobac : 689.0) 4-coumarate--CoA ligase 2... 0.03 Orthogroups_2024-Update
PSME_00017730-RA No alias (at1g20510 : 538.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
PSME_00022177-RA No alias (o24146|4cl2_tobac : 717.0) 4-coumarate--CoA ligase 2... 0.03 Orthogroups_2024-Update
Potri.001G036900 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
Potri.005G248500 No alias OPC-8:0 CoA ligase1 0.02 Orthogroups_2024-Update
Potri.010G057000 No alias AMP-dependent synthetase and ligase family protein 0.03 Orthogroups_2024-Update
Potri.012G095000 No alias AMP-dependent synthetase and ligase family protein 0.03 Orthogroups_2024-Update
Pp1s71_170V6 No alias 4-coumarate: ligase 0.03 Orthogroups_2024-Update
Seita.4G191500.1 No alias p-coumarate 0.02 Orthogroups_2024-Update
Seita.6G167900.1 No alias p-coumarate 0.02 Orthogroups_2024-Update
Seita.9G184100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G391600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G272700.1 No alias p-coumarate 0.05 Orthogroups_2024-Update
Sopen03g001090 No alias AMP-binding enzyme 0.04 Orthogroups_2024-Update
Sopen03g036780 No alias AMP-binding enzyme 0.1 Orthogroups_2024-Update
Sopen06g025930 No alias AMP-binding enzyme 0.04 Orthogroups_2024-Update
Sopen12g031420 No alias AMP-binding enzyme 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
BP GO:0008152 metabolic process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0016987 sigma factor activity IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 38 445
IPR025110 AMP-bd_C 454 529
No external refs found!