At5g52860


Description : ABC transporter G family member 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX5]


Gene families : OG_42_0000830 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000830_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g52860
Cluster HCCA clusters: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
A4A49_14774 No alias abc transporter g family member 23 0.03 Orthogroups_2024-Update
MA_103974g0010 No alias (at2g13610 : 350.0) ABC-2 type transporter family... 0.03 Orthogroups_2024-Update
PSME_00056379-RA No alias (at5g19410 : 486.0) ABC-2 type transporter family... 0.03 Orthogroups_2024-Update
Pp1s112_116V6 No alias white-brown-complex abc transporter family 0.02 Orthogroups_2024-Update
Solyc03g007690 No alias ABC transporter family protein (AHRD V3.3 *** U5FQ57_POPTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
CC GO:1902554 serine/threonine protein kinase complex IEP Predicted GO
CC GO:1902911 protein kinase complex IEP Predicted GO
CC GO:1990316 Atg1/ULK1 kinase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 312 521
IPR003439 ABC_transporter-like 45 188
No external refs found!