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  5. At5g53240

At5g53240


Description : Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FK17]


Gene families : OG_42_0001425 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001425_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g53240
Cluster HCCA clusters: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
At1g30160 No alias At1g30160 [Source:UniProtKB/TrEMBL;Acc:Q6DBP6] 0.03 Orthogroups_2024-Update
At2g45930 No alias Expressed protein [Source:UniProtKB/TrEMBL;Acc:O80826] 0.04 Orthogroups_2024-Update
At2g45940 No alias Protein of unknown function (DUF295) [Source:TAIR;Acc:AT2G45940] 0.04 Orthogroups_2024-Update
At5g46140 No alias Putative uncharacterized protein... 0.03 Orthogroups_2024-Update
Brara.B00925.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H03000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.J00916.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.K00243.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!