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  5. At5g54470

At5g54470


Description : BBX29 [Source:UniProtKB/TrEMBL;Acc:A0A178UJV0]


Gene families : OG_42_0000803 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000803_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g54470
Cluster HCCA clusters: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
A4A49_09731 No alias b-box domain protein 31 0.03 Orthogroups_2024-Update
A4A49_19758 No alias b-box domain protein 30 0.04 Orthogroups_2024-Update
A4A49_22924 No alias b-box zinc finger protein 32 0.04 Orthogroups_2024-Update
A4A49_62883 No alias b-box domain protein 30 0.03 Orthogroups_2024-Update
Brara.A02749.1 No alias BBX class-V transcription factor 0.05 Orthogroups_2024-Update
Brara.B01378.1 No alias BBX class-V transcription factor 0.08 Orthogroups_2024-Update
GRMZM2G085218 No alias B-box 32 0.02 Orthogroups_2024-Update
Glyma.07G020400 No alias B-box 32 0.03 Orthogroups_2024-Update
Glyma.08G221600 No alias B-box 32 0.05 Orthogroups_2024-Update
Glyma.12G103800 No alias B-box type zinc finger family protein 0.07 Orthogroups_2024-Update
Glyma.12G198400 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
Mp3g20050.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Potri.011G125400 No alias B-box type zinc finger family protein 0.04 Orthogroups_2024-Update
Potri.013G150500 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
Potri.017G039400 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
Pp1s364_14V6 No alias F24B18.9; CONSTANS B-box zinc finger family protein... 0.03 Orthogroups_2024-Update
Pp1s38_346V6 No alias zinc finger (b-box type) family protein 0.02 Orthogroups_2024-Update
Pp1s97_104V6 No alias zinc finger (b-box type) family protein 0.03 Orthogroups_2024-Update
Seita.1G067400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G217532.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc02g079430 No alias Zinc finger, B-box (AHRD V3.3 *-* A0A103Y479_CYNCS) 0.03 Orthogroups_2024-Update
Solyc06g063280 No alias LOW QUALITY:Zinc finger family protein (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Solyc10g006750 No alias ABC-2 and Plant PDR ABC-type transporter family protein... 0.04 Orthogroups_2024-Update
Solyc12g005660 No alias Zinc finger, B-box (AHRD V3.3 *-* A0A103Y7X2_CYNCS) 0.05 Orthogroups_2024-Update
Solyc12g005750 No alias LOW QUALITY:Zinc finger protein CONSTANS-LIKE 14 (AHRD... 0.04 Orthogroups_2024-Update
Sopen06g022740 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen10g002670 No alias B-box zinc finger 0.02 Orthogroups_2024-Update
Sopen12g001590 No alias B-box zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
MF GO:0009975 cyclase activity IEP Predicted GO
MF GO:0009976 tocopherol cyclase activity IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
CC GO:0030008 TRAPP complex IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!