1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At5g54630

At5g54630


Description : AT5g54630/MRB17_13 [Source:UniProtKB/TrEMBL;Acc:Q9FIU1]


Gene families : OG_42_0000675 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000675_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g54630
Cluster HCCA clusters: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
268776 No alias zinc finger (C2H2 type) family protein 0.04 Orthogroups_2024-Update
At1g75710 No alias C2H2-like zinc finger protein... 0.03 Orthogroups_2024-Update
GRMZM2G028046 No alias C2H2-like zinc finger protein 0.02 Orthogroups_2024-Update
GRMZM2G105224 No alias zinc finger protein-related 0.03 Orthogroups_2024-Update
Glyma.06G265800 No alias zinc finger protein-related 0.03 Orthogroups_2024-Update
Glyma.13G250800 No alias zinc finger protein-related 0.03 Orthogroups_2024-Update
PSME_00048958-RA No alias (at1g75710 : 218.0) C2H2-like zinc finger protein;... 0.02 Orthogroups_2024-Update
PSME_00055892-RA No alias (at1g75710 : 340.0) C2H2-like zinc finger protein;... 0.03 Orthogroups_2024-Update
Potri.001G415600 No alias zinc finger protein-related 0.02 Orthogroups_2024-Update
Sopen07g032110 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!