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  5. At5g55120

At5g55120


Description : VTC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UIM1]


Gene families : OG_42_0002848 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002848_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g55120
Cluster HCCA clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Brara.A01670.1 No alias GDP-L-galactose phosphorylase *(VTC2/5) 0.04 Orthogroups_2024-Update
Brara.H01538.1 No alias GDP-L-galactose phosphorylase *(VTC2/5) 0.04 Orthogroups_2024-Update
Brara.K00119.1 No alias GDP-L-galactose phosphorylase *(VTC2/5) 0.04 Orthogroups_2024-Update
Glyma.14G021800 No alias mannose-1-phosphate guanylyltransferase... 0.03 Orthogroups_2024-Update
Kfl01397_0010 kfl01397_0010_v1.1 (at4g26850 : 433.0) Encodes a novel protein involved in... 0.02 Orthogroups_2024-Update
Pp1s114_207V6 No alias F10M23.190; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.7G278400.1 No alias GDP-L-galactose phosphorylase *(VTC2/5) 0.04 Orthogroups_2024-Update
Sobic.008G064700.1 No alias GDP-L-galactose phosphorylase *(VTC2/5) 0.06 Orthogroups_2024-Update
Solyc06g073320 No alias GDP-L-galactose phosphorylase 1 (AHRD V3.3 *** AT4G26850.1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!