At5g56200


Description : C2H2 type zinc finger transcription factor family [Source:UniProtKB/TrEMBL;Acc:Q9FH19]


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g56200
Cluster HCCA clusters: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
A4A49_40512 No alias zinc finger protein zat10 0.03 Orthogroups_2024-Update
At1g27730 No alias Zinc finger protein ZAT10... 0.04 Orthogroups_2024-Update
At2g45120 No alias Zinc finger protein ZAT4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD0] 0.05 Orthogroups_2024-Update
At3g10470 No alias C2H2-type zinc finger family protein... 0.03 Orthogroups_2024-Update
At5g59820 No alias Zinc finger protein ZAT12... 0.04 Orthogroups_2024-Update
Bradi1g16010 No alias salt tolerance zinc finger 0.02 Orthogroups_2024-Update
Brara.A03482.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Brara.C00162.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Brara.C03744.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Brara.D00521.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Brara.D01686.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Brara.E00765.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Brara.F01949.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Brara.G01602.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Brara.I00845.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Brara.I03003.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Brara.J01350.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Glyma.02G311100 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.10G045400 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.11G142500 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.13G146400 No alias C2H2-type zinc finger family protein 0.04 Orthogroups_2024-Update
Glyma.15G040700 No alias C2H2-type zinc finger family protein 0.05 Orthogroups_2024-Update
Glyma.19G186200 No alias C2H2-type zinc finger family protein 0.04 Orthogroups_2024-Update
LOC_Os02g19180 No alias ZOS2-06 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
PSME_00025742-RA No alias (at3g60580 : 101.0) C2H2-like zinc finger protein;... 0.04 Orthogroups_2024-Update
PSME_00056418-RA No alias (at1g02040 : 111.0) C2H2-type zinc finger family... 0.03 Orthogroups_2024-Update
Potri.002G143600 No alias C2H2-type zinc finger family protein 0.04 Orthogroups_2024-Update
Potri.014G017300 No alias salt tolerance zinc finger 0.02 Orthogroups_2024-Update
Potri.014G066200 No alias C2H2-type zinc finger family protein 0.04 Orthogroups_2024-Update
Potri.016G098100 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Seita.9G357400.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G035000.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G330100.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G225700.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Solyc04g077980 No alias C2H2-type zinc finger protein 0.03 Orthogroups_2024-Update
Solyc11g073060 No alias Zinc finger family protein (AHRD V3.3 *** B9HM54_POPTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!