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Description : Pentatricopeptide repeat-containing protein At5g56310 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMA1]
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Arabidopsis release: At5g56310 | |
| Cluster | HCCA clusters: Cluster_48 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 109721 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| 79732 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| A4A49_19306 | No alias | pentatricopeptide repeat-containing protein,... | 0.03 | Orthogroups_2024-Update | |
| At4g25270 | No alias | Pentatricopeptide repeat-containing protein At4g25270,... | 0.04 | Orthogroups_2024-Update | |
| Bradi1g03670 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi1g36120 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Bradi5g14000 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.G01460.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.I04209.1 | No alias | RNA editing factor *(MEF100) | 0.03 | Orthogroups_2024-Update | |
| Glyma.06G322500 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.08G289802 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.06 | Orthogroups_2024-Update | |
| Glyma.09G180500 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.13G150300 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.13G313300 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.13G332400 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.14G066100 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G061610.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU7Hr1G030850.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| LOC_Os01g59890 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os12g08140 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| PSME_00004828-RA | No alias | (at4g13650 : 573.0) Pentatricopeptide repeat (PPR)... | 0.02 | Orthogroups_2024-Update | |
| PSME_00044871-RA | No alias | (at2g39620 : 426.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| Potri.001G258500 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.002G245200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.004G059400 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Pp1s169_110V6 | No alias | T12J13.14; pentatricopeptide (PPR) repeat-containing... | 0.03 | Orthogroups_2024-Update | |
| Sobic.002G389200.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.003G119100.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.003G182501.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G356100.1 | No alias | RNA editing factor *(CRR2) | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G051600.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.006G114300.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Solyc11g064750 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.02 | Orthogroups_2024-Update | |
| Sopen03g038830 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
| Sopen07g003070 | No alias | PPR repeat | 0.04 | Orthogroups_2024-Update | |
| Sopen09g004550 | No alias | PPR repeat family | 0.05 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004664 | prephenate dehydratase activity | IEP | Predicted GO |
| BP | GO:0006558 | L-phenylalanine metabolic process | IEP | Predicted GO |
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Predicted GO |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Predicted GO |
| BP | GO:0009094 | L-phenylalanine biosynthetic process | IEP | Predicted GO |
| BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Predicted GO |
| MF | GO:0016836 | hydro-lyase activity | IEP | Predicted GO |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | Predicted GO |
| BP | GO:1902221 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process | IEP | Predicted GO |
| BP | GO:1902223 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process | IEP | Predicted GO |
| No external refs found! |