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At5g56380


Description : FBD-associated F-box protein At5g56380 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM93]


Gene families : OG_42_0000413 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000413_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g56380
Cluster HCCA clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Brara.I03753.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.13G278200 No alias F-box/RNI-like superfamily protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
InterPro domains Description Start Stop
IPR006566 FBD 360 405
IPR013101 Leu-rich_rpt_2 158 183
IPR001810 F-box_dom 3 36
No external refs found!