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  5. At5g57320

At5g57320


Description : Villin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVC6]


Gene families : OG_42_0000618 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000618_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g57320
Cluster HCCA clusters: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
Bradi2g35467 No alias villin-like 1 0.02 Orthogroups_2024-Update
LOC_Os06g44890 No alias villin protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g14230 No alias villin, putative, expressed 0.02 Orthogroups_2024-Update
Mp1g24640.1 No alias villin actin-crosslinking factor 0.02 Orthogroups_2024-Update
Potri.009G045000 No alias villin-like 1 0.03 Orthogroups_2024-Update
Pp1s100_30V6 No alias villin 2 0.02 Orthogroups_2024-Update
Seita.5G454400.1 No alias villin actin-crosslinking factor 0.04 Orthogroups_2024-Update
Sobic.003G427600.1 No alias villin actin-crosslinking factor 0.03 Orthogroups_2024-Update
Solyc10g080100 No alias villin 2 (AHRD V3.3 *** AT2G41740.2) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA InterProScan predictions
BP GO:0007010 cytoskeleton organization IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003128 Villin_headpiece 927 962
IPR007123 Gelsolin-like_dom 149 209
IPR007123 Gelsolin-like_dom 269 333
IPR007123 Gelsolin-like_dom 643 714
IPR007123 Gelsolin-like_dom 29 111
No external refs found!