At5g57530

Description : Probable xyloglucan endotransglucosylase/hydrolase protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKL9]

Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At5g57530
Cluster	HCCA clusters: Cluster_211

Target	Alias	Description	ECC score	Gene Family Method
233454	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.02	Orthogroups_2024-Update
A4A49_15625	No alias	xyloglucan endotransglucosylasehydrolase 1	0.03	Orthogroups_2024-Update
A4A49_21656	No alias	xyloglucan endotransglucosylasehydrolase protein 24	0.03	Orthogroups_2024-Update
AC210669.3_FG001	No alias	Xyloglucan endotransglucosylase/hydrolase family protein	0.04	Orthogroups_2024-Update
At2g36870	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	Orthogroups_2024-Update
Brara.J02057.1	No alias	EC_2.4 glycosyltransferase	0.03	Orthogroups_2024-Update
Glyma.02G068900	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.03	Orthogroups_2024-Update
Glyma.13G322500	No alias	xyloglucan endotransglucosylase/hydrolase 32	0.03	Orthogroups_2024-Update
Glyma.17G157400	No alias	xyloglucan endotransglucosylase/hydrolase 6	0.03	Orthogroups_2024-Update
Glyma.18G106500	No alias	xyloglucan endotransglucosylase/hydrolase 15	0.05	Orthogroups_2024-Update
HORVU0Hr1G022110.1	No alias	EC_2.4 glycosyltransferase	0.03	Orthogroups_2024-Update
HORVU7Hr1G098260.1	No alias	EC_2.4 glycosyltransferase	0.03	Orthogroups_2024-Update
HORVU7Hr1G098320.3	No alias	EC_2.4 glycosyltransferase	0.03	Orthogroups_2024-Update
HORVU7Hr1G098440.2	No alias	EC_2.4 glycosyltransferase	0.03	Orthogroups_2024-Update
MA_10434153g0020	No alias	(q41638\|xtha_phaan : 378.0) Xyloglucan...	0.02	Orthogroups_2024-Update
Mp4g10000.1	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.02	Orthogroups_2024-Update
PSME_00015816-RA	No alias	(at4g25810 : 292.0) xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00023359-RA	No alias	(at5g13870 : 301.0) EXGT-A4, endoxyloglucan...	0.03	Orthogroups_2024-Update
PSME_00030735-RA	No alias	(at4g37800 : 286.0) xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00030736-RA	No alias	(at4g37800 : 278.0) xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00031691-RA	No alias	(p35694\|bru1_soybn : 332.0) Brassinosteroid-regulated...	0.03	Orthogroups_2024-Update
PSME_00047371-RA	No alias	(p35694\|bru1_soybn : 289.0) Brassinosteroid-regulated...	0.04	Orthogroups_2024-Update
Potri.013G005700	No alias	xyloglucan endotransglycosylase 6	0.03	Orthogroups_2024-Update
Potri.018G095100	No alias	xyloglucan endotransglycosylase 6	0.05	Orthogroups_2024-Update
Pp1s309_28V6	No alias	xyloglucan endotransglycosylase	0.02	Orthogroups_2024-Update
Pp1s309_36V6	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	Orthogroups_2024-Update
Pp1s309_41V6	No alias	xyloglucan endotransglucosylase hydrolase protein a	0.02	Orthogroups_2024-Update
Sobic.001G179400.1	No alias	EC_2.4 glycosyltransferase	0.02	Orthogroups_2024-Update
Sobic.001G309000.1	No alias	xyloglucan endotransglucosylase/hydrolase *(XTH) &...	0.04	Orthogroups_2024-Update
Sobic.010G246400.1	No alias	EC_2.4 glycosyltransferase	0.02	Orthogroups_2024-Update
Solyc03g093120	No alias	xyloglucan endotransglucosylase-hydrolase	0.02	Orthogroups_2024-Update
Solyc07g055990	No alias	Xyloglucan endotransglucosylase/hydrolase 7 (AHRD V1...	0.03	Orthogroups_2024-Update
Solyc11g065600	No alias	xyloglucan endotransglucosylase-hydrolase 4	0.03	Orthogroups_2024-Update
Sopen07g005120	No alias	Glycosyl hydrolases family 16	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEA	InterProScan predictions
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
CC	GO:0048046	apoplast	IEA	InterProScan predictions
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004126	cytidine deaminase activity	IEP	Predicted GO
MF	GO:0005199	structural constituent of cell wall	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0006213	pyrimidine nucleoside metabolic process	IEP	Predicted GO
BP	GO:0006216	cytidine catabolic process	IEP	Predicted GO
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Predicted GO
BP	GO:0009056	catabolic process	IEP	Predicted GO
BP	GO:0009057	macromolecule catabolic process	IEP	Predicted GO
BP	GO:0009119	ribonucleoside metabolic process	IEP	Predicted GO
BP	GO:0009164	nucleoside catabolic process	IEP	Predicted GO
BP	GO:0009664	plant-type cell wall organization	IEP	Predicted GO
BP	GO:0009972	cytidine deamination	IEP	Predicted GO
CC	GO:0016459	myosin complex	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Predicted GO
MF	GO:0019239	deaminase activity	IEP	Predicted GO
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Predicted GO
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Predicted GO
BP	GO:0034656	nucleobase-containing small molecule catabolic process	IEP	Predicted GO
BP	GO:0042254	ribosome biogenesis	IEP	Predicted GO
BP	GO:0042454	ribonucleoside catabolic process	IEP	Predicted GO
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Predicted GO
BP	GO:0044248	cellular catabolic process	IEP	Predicted GO
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Predicted GO
BP	GO:0046087	cytidine metabolic process	IEP	Predicted GO
BP	GO:0046131	pyrimidine ribonucleoside metabolic process	IEP	Predicted GO
BP	GO:0046133	pyrimidine ribonucleoside catabolic process	IEP	Predicted GO
BP	GO:0046135	pyrimidine nucleoside catabolic process	IEP	Predicted GO
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Predicted GO
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Predicted GO
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Predicted GO
BP	GO:0072529	pyrimidine-containing compound catabolic process	IEP	Predicted GO
BP	GO:1901575	organic substance catabolic process	IEP	Predicted GO
BP	GO:1901658	glycosyl compound catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR010713	XET_C	238	282
IPR000757	GH16	29	207

External Links

No external refs found!

At5g57530

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation