1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At5g58190

At5g58190


Description : Evolutionarily conserved C-terminal region 10 [Source:UniProtKB/TrEMBL;Acc:F4KDJ9]


Gene families : OG_42_0000396 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g58190
Cluster HCCA clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Kfl00036_0080 kfl00036_0080_v1.1 (at3g13060 : 152.0) evolutionarily conserved C-terminal... 0.02 Orthogroups_2024-Update
MA_10435373g0010 No alias (at1g79270 : 253.0) evolutionarily conserved C-terminal... 0.03 Orthogroups_2024-Update
Mp1g00140.1 No alias methylation reader (ECT) 0.02 Orthogroups_2024-Update
Solyc01g103540 No alias evolutionarily conserved C-terminal region 2 (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0016255 attachment of GPI anchor to protein IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR007275 YTH_domain 325 462
No external refs found!