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  5. At5g59690

At5g59690


Description : Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54]


Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g59690
Cluster HCCA clusters: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Brara.C01885.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Brara.D02284.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Brara.F00466.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Brara.F01828.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Brara.G01399.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Cre06.g268400 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre06.g275700 No alias histone H4 0.01 Orthogroups_2024-Update
Cre12.g504850 No alias histone H4 0.01 Orthogroups_2024-Update
Glyma.11G146481 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G043200 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G063200 No alias histone H4 0.02 Orthogroups_2024-Update
HORVU3Hr1G088160.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
MA_10428555g0010 No alias (at5g59970 : 161.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Mp4g13440.1 No alias histone (H4) 0.02 Orthogroups_2024-Update
Solyc04g011390 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Solyc05g054610 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.05 Orthogroups_2024-Update
Solyc06g005430 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Solyc06g075830 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Solyc06g075850 No alias No description available 0.03 Orthogroups_2024-Update
Solyc06g075930 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Solyc06g075960 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Solyc11g066160 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Solyc11g072840 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Sopen04g005580 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen06g032280 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen06g032380 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen11g030510 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen11g030530 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004325 ferrochelatase activity IEP Predicted GO
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0009435 NAD biosynthetic process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
BP GO:0019674 NAD metabolic process IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!