Description : AT1G07770 protein [Source:UniProtKB/TrEMBL;Acc:B9DI04]
Gene families : OG_42_0001161 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001161_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Arabidopsis release: At5g59850 | |
Cluster | HCCA clusters: Cluster_6 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
228163 | No alias | Ribosomal protein S8 family protein | 0.08 | Orthogroups_2024-Update | |
Bradi2g23110 | No alias | ribosomal protein S15A | 0.06 | Orthogroups_2024-Update | |
Bradi2g54450 | No alias | ribosomal protein S15A | 0.08 | Orthogroups_2024-Update | |
Brara.B01062.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.08 | Orthogroups_2024-Update | |
Brara.C01067.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.11 | Orthogroups_2024-Update | |
Brara.F00468.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.08 | Orthogroups_2024-Update | |
Brara.J01354.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.08 | Orthogroups_2024-Update | |
Cre05.g234637 | No alias | Ribosomal protein S8 family protein | 0.1 | Orthogroups_2024-Update | |
GRMZM2G083497 | No alias | ribosomal protein S15A | 0.07 | Orthogroups_2024-Update | |
Glyma.01G240000 | No alias | ribosomal protein S15A | 0.05 | Orthogroups_2024-Update | |
Glyma.07G255500 | No alias | ribosomal protein S15A | 0.08 | Orthogroups_2024-Update | |
Glyma.11G003600 | No alias | ribosomal protein S15A | 0.04 | Orthogroups_2024-Update | |
Glyma.11G003700 | No alias | ribosomal protein S15A | 0.04 | Orthogroups_2024-Update | |
Glyma.15G102550 | No alias | ribosomal protein S15A | 0.04 | Orthogroups_2024-Update | |
Glyma.17G018600 | No alias | ribosomal protein S15A | 0.1 | Orthogroups_2024-Update | |
HORVU1Hr1G072060.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.1 | Orthogroups_2024-Update | |
HORVU3Hr1G086930.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.04 | Orthogroups_2024-Update | |
Kfl00864_0040 | kfl00864_0040_v1.1 | (at5g59850 : 230.0) Ribosomal protein S8 family protein;... | 0.02 | Orthogroups_2024-Update | |
LOC_Os07g10720 | No alias | 40S ribosomal protein S15a, putative, expressed | 0.03 | Orthogroups_2024-Update | |
MA_57835g0010 | No alias | (at3g46040 : 223.0) Regulated by TCP20.; ribosomal... | 0.05 | Orthogroups_2024-Update | |
MA_82191g0010 | No alias | (at3g46040 : 223.0) Regulated by TCP20.; ribosomal... | 0.03 | Orthogroups_2024-Update | |
Mp8g06510.1 | No alias | component RPS15a of SSU proteome | 0.05 | Orthogroups_2024-Update | |
Mp8g13010.1 | No alias | component RPS15a of SSU proteome | 0.03 | Orthogroups_2024-Update | |
PSME_00015526-RA | No alias | (at5g59850 : 244.0) Ribosomal protein S8 family protein;... | 0.05 | Orthogroups_2024-Update | |
Potri.001G118100 | No alias | ribosomal protein S15A | 0.09 | Orthogroups_2024-Update | |
Potri.010G208700 | No alias | Ribosomal protein S8 family protein | 0.06 | Orthogroups_2024-Update | |
Pp1s115_101V6 | No alias | 40s ribosomal protein s15a | 0.05 | Orthogroups_2024-Update | |
Pp1s1_304V6 | No alias | 40s ribosomal protein s15a | 0.02 | Orthogroups_2024-Update | |
Pp1s426_18V6 | No alias | 40s ribosomal protein s15a | 0.06 | Orthogroups_2024-Update | |
Pp1s45_88V6 | No alias | 40s ribosomal protein s15a | 0.06 | Orthogroups_2024-Update | |
Seita.2G319400.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.06 | Orthogroups_2024-Update | |
Seita.5G374600.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
Seita.8G174900.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.02 | Orthogroups_2024-Update | |
Sobic.003G012700.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.07 | Orthogroups_2024-Update | |
Sobic.007G212600.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.07 | Orthogroups_2024-Update | |
Sopen04g025860 | No alias | Ribosomal protein S8 | 0.04 | Orthogroups_2024-Update | |
Sopen04g026010 | No alias | Ribosomal protein S8 | 0.02 | Orthogroups_2024-Update | |
Sopen04g026020 | No alias | Ribosomal protein S8 | 0.08 | Orthogroups_2024-Update | |
evm.model.contig_2045.5 | No alias | (at5g59850 : 190.0) Ribosomal protein S8 family protein;... | 0.1 | Orthogroups_2024-Update | |
evm.model.tig00000158.110 | No alias | (q9at34|rs15a_dauca : 210.0) 40S ribosomal protein S15a... | 0.06 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000154 | rRNA modification | IEP | Predicted GO |
BP | GO:0001101 | response to acid chemical | IEP | Predicted GO |
BP | GO:0001510 | RNA methylation | IEP | Predicted GO |
BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003937 | IMP cyclohydrolase activity | IEP | Predicted GO |
MF | GO:0004017 | adenylate kinase activity | IEP | Predicted GO |
MF | GO:0004643 | phosphoribosylaminoimidazolecarboxamide formyltransferase activity | IEP | Predicted GO |
MF | GO:0004797 | thymidine kinase activity | IEP | Predicted GO |
CC | GO:0005622 | intracellular | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006275 | regulation of DNA replication | IEP | Predicted GO |
BP | GO:0006351 | transcription, DNA-templated | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
MF | GO:0008649 | rRNA methyltransferase activity | IEP | Predicted GO |
BP | GO:0009415 | response to water | IEP | Predicted GO |
BP | GO:0009451 | RNA modification | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
MF | GO:0016435 | rRNA (guanine) methyltransferase activity | IEP | Predicted GO |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Predicted GO |
MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | Predicted GO |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
MF | GO:0019136 | deoxynucleoside kinase activity | IEP | Predicted GO |
MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predicted GO |
MF | GO:0019206 | nucleoside kinase activity | IEP | Predicted GO |
MF | GO:0019238 | cyclohydrolase activity | IEP | Predicted GO |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
MF | GO:0030515 | snoRNA binding | IEP | Predicted GO |
BP | GO:0031167 | rRNA methylation | IEP | Predicted GO |
BP | GO:0032774 | RNA biosynthetic process | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
BP | GO:0036265 | RNA (guanine-N7)-methylation | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Predicted GO |
BP | GO:0051052 | regulation of DNA metabolic process | IEP | Predicted GO |
BP | GO:0070475 | rRNA base methylation | IEP | Predicted GO |
BP | GO:0070476 | rRNA (guanine-N7)-methylation | IEP | Predicted GO |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Predicted GO |
MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901700 | response to oxygen-containing compound | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000630 | Ribosomal_S8 | 7 | 130 |
No external refs found! |