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At5g60470


Description : C2H2 and C2HC zinc fingers superfamily protein [Source:TAIR;Acc:AT5G60470]


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g60470
Cluster HCCA clusters: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
A4A49_19698 No alias protein indeterminate-domain 11 0.02 Orthogroups_2024-Update
At2g02070 No alias Protein indeterminate-domain 5, chloroplastic... 0.03 Orthogroups_2024-Update
Brara.B02772.1 No alias C2H2 subclass IDD transcription factor 0.06 Orthogroups_2024-Update
HORVU4Hr1G064740.2 No alias C2H2 subclass IDD transcription factor 0.04 Orthogroups_2024-Update
MA_12028g0010 No alias (at2g01940 : 315.0) May be involved in an early event in... 0.04 Orthogroups_2024-Update
Potri.014G180600 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Pp1s218_34V6 No alias nucleic acid binding 0.03 Orthogroups_2024-Update
Pp1s43_228V6 No alias nucleic acid binding 0.03 Orthogroups_2024-Update
Sopen10g033630 No alias Zinc finger, C2H2 type 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 64 86
No external refs found!