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  5. At5g64920

At5g64920


Description : CIP8 [Source:UniProtKB/TrEMBL;Acc:A0A178UJC6]


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g64920
Cluster HCCA clusters: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Bradi1g62350 No alias RING-H2 finger C1A 0.03 Orthogroups_2024-Update
Bradi3g37800 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Bradi3g56300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.I04140.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G072430.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os03g22830 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g42700 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g26400 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_219769g0010 No alias (at5g20910 : 155.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.006G032100 No alias RING-H2 finger C1A 0.04 Orthogroups_2024-Update
Potri.016G029300 No alias RING-H2 finger C1A 0.07 Orthogroups_2024-Update
Seita.2G181600.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Predicted GO
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predicted GO
BP GO:0051189 prosthetic group metabolic process IEP Predicted GO
MF GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 257 298
IPR039525 RNF126-like_zinc-ribbon 14 46
No external refs found!