1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At5g65360

At5g65360


Description : Histone H3 [Source:UniProtKB/TrEMBL;Acc:A0A178WG20]


Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g65360
Cluster HCCA clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
269004 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
438193 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
A4A49_56508 No alias histone h3.2 0.06 Orthogroups_2024-Update
A4A49_57080 No alias histone h3.2 0.07 Orthogroups_2024-Update
A4A49_61103 No alias histone h3.2 0.07 Orthogroups_2024-Update
Brara.B00354.1 No alias histone *(H3) 0.05 Orthogroups_2024-Update
Brara.B03430.1 No alias histone *(H3) 0.06 Orthogroups_2024-Update
Brara.C00416.1 No alias histone *(H3) 0.04 Orthogroups_2024-Update
Brara.D00649.1 No alias histone *(H3) 0.07 Orthogroups_2024-Update
Brara.H02834.1 No alias histone *(H3) 0.04 Orthogroups_2024-Update
Brara.I01745.1 No alias histone *(H3) 0.04 Orthogroups_2024-Update
Brara.J02314.1 No alias histone *(H3) 0.04 Orthogroups_2024-Update
Cre06.g264650 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g265250 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g267950 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g274000 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g274850 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g276600 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g276850 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre12.g504650 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g504800 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g505500 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre12.g506300 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre12.g506500 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre17.g708150 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g708700 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre17.g709050 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G078314 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G130079 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G171387 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G179005 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G355773 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G418258 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G188600 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G188700 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.07G202500 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G227400 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G245000 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.12G055200 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G173100 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G342000 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.15G032300 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
HORVU2Hr1G090210.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
HORVU4Hr1G073150.1 No alias histone *(H3) 0.04 Orthogroups_2024-Update
HORVU6Hr1G031580.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
HORVU7Hr1G033030.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Kfl00053_0050 kfl00053_0050_v1.1 (p08437|h3_volca : 147.0) Histone H3 - Volvox carteri &... 0.02 Orthogroups_2024-Update
Kfl00240_g18 kfl00240_g18_v1.1 (at5g10980 : 254.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Kfl00509_0020 kfl00509_0020_v1.1 (at5g10980 : 265.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Mp7g10730.1 No alias histone (H3) 0.03 Orthogroups_2024-Update
Mp7g18030.1 No alias histone (H3) 0.02 Orthogroups_2024-Update
PSME_00017144-RA No alias (at5g10980 : 144.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Potri.005G235700 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Pp1s12_93V6 No alias histone h3 0.02 Orthogroups_2024-Update
Seita.3G227400.1 No alias histone *(H3) 0.05 Orthogroups_2024-Update
Seita.4G066000.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Sobic.004G170500.2 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Sobic.006G081800.1 No alias histone *(H3) 0.05 Orthogroups_2024-Update
Solyc01g074000 No alias Histone H3 (AHRD V3.3 *** A0A0E0P928_ORYRU) 0.04 Orthogroups_2024-Update
Solyc01g079110 No alias Histone H3 (AHRD V3.3 *** A0A0V0H170_SOLCH) 0.05 Orthogroups_2024-Update
Solyc01g080600 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.04 Orthogroups_2024-Update
Solyc01g086820 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.04 Orthogroups_2024-Update
Solyc02g077480 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.04 Orthogroups_2024-Update
Solyc04g074580 No alias Histone H3 (AHRD V3.3 *** K7VSQ3_MAIZE) 0.03 Orthogroups_2024-Update
Solyc10g008910 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.04 Orthogroups_2024-Update
Solyc12g056540 No alias Histone H3 (AHRD V3.3 *** K4DFY5_SOLLC) 0.03 Orthogroups_2024-Update
Sopen01g030790 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen01g032420 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen01g033540 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen01g033560 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen01g033790 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen02g022390 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen10g004700 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen12g029140 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
evm.model.contig_2255.2 No alias (at5g10980 : 218.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003896 DNA primase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004797 thymidine kinase activity IEP Predicted GO
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0019136 deoxynucleoside kinase activity IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
MF GO:0019206 nucleoside kinase activity IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!