At5g65570

Description : Pentatricopeptide repeat-containing protein At5g65570 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSL8]

Gene families : OG_42_0017044 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At5g65570
Cluster	HCCA clusters: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method	Actions
Brara.F02425.1	No alias	Unknown function	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	Predicted GO
BP	GO:0009451	RNA modification	IEP	Predicted GO
MF	GO:0009982	pseudouridine synthase activity	IEP	Predicted GO
MF	GO:0016866	intramolecular transferase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	433	479
IPR002885	Pentatricopeptide_repeat	130	176
IPR002885	Pentatricopeptide_repeat	230	276
IPR002885	Pentatricopeptide_repeat	331	379
IPR002885	Pentatricopeptide_repeat	507	526
IPR032867	DYW_dom	605	728

External Links

No external refs found!