At5g65590

Description : SCAP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIB2]

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At5g65590
Cluster	HCCA clusters: Cluster_219

Target	Alias	Description	ECC score	Gene Family Method
A4A49_12312	No alias	dof zinc finger protein dof2.1	0.05	Orthogroups_2024-Update
At4g21080	No alias	Dof zinc finger protein DOF4.5...	0.03	Orthogroups_2024-Update
Bradi1g15420	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Bradi1g26570	No alias	TARGET OF MONOPTEROS 6	0.02	Orthogroups_2024-Update
Bradi3g25670	No alias	cycling DOF factor 1	0.03	Orthogroups_2024-Update
Brara.D00083.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.F01530.1	No alias	transcription factor *(DOF)	0.05	Orthogroups_2024-Update
GRMZM2G123900	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.03G258800	No alias	Dof-type zinc finger DNA-binding family protein	0.01	Orthogroups_2024-Update
Glyma.08G195300	No alias	DOF zinc finger protein 1	0.02	Orthogroups_2024-Update
LOC_Os01g17000	No alias	expressed protein	0.02	Orthogroups_2024-Update
LOC_Os03g07360	No alias	expressed protein	0.02	Orthogroups_2024-Update
LOC_Os03g55610	No alias	dof zinc finger domain containing protein, putative, expressed	0.02	Orthogroups_2024-Update
MA_56828g0010	No alias	(at5g02460 : 145.0) Dof-type zinc finger DNA-binding...	0.03	Orthogroups_2024-Update
Sobic.001G489900.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Solyc03g112930	No alias	Dof zinc finger protein (AHRD V3.3 *** A0A0B6VJP1_TOBAC)	0.02	Orthogroups_2024-Update
Solyc04g070960	No alias	Dof zinc finger protein (AHRD V3.3 - W9S6D3_9ROSA)	0.02	Orthogroups_2024-Update
Solyc11g010940	No alias	Dof zinc finger protein (AHRD V3.3 *** W9T134_9ROSA)	0.02	Orthogroups_2024-Update
Sopen02g023480	No alias	Dof domain, zinc finger	0.04	Orthogroups_2024-Update
Sopen06g022000	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen06g027770	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003954	NADH dehydrogenase activity	IEP	Predicted GO
MF	GO:0004857	enzyme inhibitor activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0006497	protein lipidation	IEP	Predicted GO
BP	GO:0006505	GPI anchor metabolic process	IEP	Predicted GO
BP	GO:0006506	GPI anchor biosynthetic process	IEP	Predicted GO
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	Predicted GO
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	Predicted GO
MF	GO:0008408	3'-5' exonuclease activity	IEP	Predicted GO
MF	GO:0008484	sulfuric ester hydrolase activity	IEP	Predicted GO
MF	GO:0015098	molybdate ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015689	molybdate ion transport	IEP	Predicted GO
MF	GO:0016872	intramolecular lyase activity	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0030234	enzyme regulator activity	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	Predicted GO
MF	GO:0098772	molecular function regulator	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	39	95

External Links

No external refs found!

At5g65590

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation