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  5. At5g67450

At5g67450


Description : ZF1 [Source:UniProtKB/TrEMBL;Acc:A0A178UTI6]


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At5g67450
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
At3g49930 No alias At3g49930 [Source:UniProtKB/TrEMBL;Acc:Q9SN24] 0.03 Orthogroups_2024-Update
HORVU5Hr1G095320.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G113080.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g66570 No alias ZOS1-19 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g19180 No alias ZOS2-06 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g17150 No alias ZOS3-09 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
Seita.2G378400.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Seita.4G291500.1 No alias C2H2-type subclass ZAT transcription factor 0.04 Orthogroups_2024-Update
Sobic.001G416200.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G015600.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!