1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g119700

Solyc03g119700


Description : ATP-dependent Clp protease adaptor protein ClpS (AHRD V3.3 *** G7JYE1_MEDTR)


Gene families : OG_42_0004685 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004685_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g119700
Cluster HCCA clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
69252 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.02 Orthogroups_2024-Update
Brara.B01807.1 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.07 Orthogroups_2024-Update
Brara.G02508.1 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.03 Orthogroups_2024-Update
Cre17.g696400 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.03 Orthogroups_2024-Update
Glyma.02G098100 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.02 Orthogroups_2024-Update
Glyma.07G089500 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.02 Orthogroups_2024-Update
Glyma.09G187300 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.03 Orthogroups_2024-Update
HORVU2Hr1G003460.3 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.02 Orthogroups_2024-Update
LOC_Os08g33540 No alias ATP-dependent Clp protease adaptor protein ClpS... 0.03 Orthogroups_2024-Update
Potri.008G117800 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.03 Orthogroups_2024-Update
Pp1s40_52V6 No alias atp-dependent clp protease adaptor protein containing protein 0.02 Orthogroups_2024-Update
Sobic.007G135800.1 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.04 Orthogroups_2024-Update
Sopen03g038530 No alias ATP-dependent Clp protease adaptor protein ClpS 0.1 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0030163 protein catabolic process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003769 ClpS_core 79 145
No external refs found!