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  5. Solyc03g120070

Solyc03g120070


Description : Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** U5FID5_POPTR)


Gene families : OG_42_0011256 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011256_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g120070
Cluster HCCA clusters: Cluster_108


Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 313 360
IPR002885 Pentatricopeptide_repeat 385 432
IPR002885 Pentatricopeptide_repeat 454 502
IPR002885 Pentatricopeptide_repeat 594 642
IPR002885 Pentatricopeptide_repeat 528 569
IPR002885 Pentatricopeptide_repeat 274 304
IPR002885 Pentatricopeptide_repeat 669 692
IPR001128 Cyt_P450 2 89
No external refs found!