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  5. Solyc01g028810

Solyc01g028810


Description : Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU)


Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g028810
Cluster HCCA clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
168153 No alias chaperonin 60 beta 0.03 Orthogroups_2024-Update
At2g28000 No alias SLP [Source:UniProtKB/TrEMBL;Acc:A0A178VZW6] 0.04 Orthogroups_2024-Update
At2g33210 No alias Chaperonin CPN60-like 1, mitochondrial... 0.04 Orthogroups_2024-Update
At3g13470 No alias Chaperonin 60 subunit beta 2, chloroplastic... 0.03 Orthogroups_2024-Update
At3g23990 No alias Chaperonin CPN60, mitochondrial... 0.04 Orthogroups_2024-Update
Bradi1g50270 No alias chaperonin 60 beta 0.03 Orthogroups_2024-Update
Bradi2g18260 No alias heat shock protein 60-3A 0.03 Orthogroups_2024-Update
Bradi3g28070 No alias heat shock protein 60 0.03 Orthogroups_2024-Update
Bradi5g02890 No alias chaperonin-60alpha 0.03 Orthogroups_2024-Update
Brara.B00789.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.05 Orthogroups_2024-Update
Brara.E01070.1 No alias chaperone *(Hsp60) 0.03 Orthogroups_2024-Update
Brara.E01461.1 No alias chaperone *(Hsp60) & subunit beta of Cpn60 chaperonin... 0.03 Orthogroups_2024-Update
Brara.G01341.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.05 Orthogroups_2024-Update
Cre04.g231222 No alias chaperonin-60alpha 0.03 Orthogroups_2024-Update
Cre06.g309100 No alias heat shock protein 60 0.03 Orthogroups_2024-Update
Cre07.g339150 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Cre17.g741450 No alias chaperonin 60 beta 0.02 Orthogroups_2024-Update
Glyma.02G126300 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Glyma.10G127800 No alias heat shock protein 60 0.03 Orthogroups_2024-Update
Glyma.15G250500 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G079910.6 No alias chaperone *(Hsp60) 0.05 Orthogroups_2024-Update
HORVU2Hr1G007840.7 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
HORVU4Hr1G078820.3 No alias chaperone *(Hsp60) 0.08 Orthogroups_2024-Update
Kfl00076_0150 kfl00076_0150_v1.... (p08927|rubb_pea : 851.0) RuBisCO large subunit-binding... 0.04 Orthogroups_2024-Update
Kfl00113_0150 kfl00113_0150_v1.1 (p08926|ruba_pea : 818.0) RuBisCO large subunit-binding... 0.04 Orthogroups_2024-Update
Kfl00292_0140 kfl00292_0140_v1.1 (q05046|ch62_cucma : 837.0) Chaperonin CPN60-2,... 0.03 Orthogroups_2024-Update
MA_97627g0010 No alias (p08927|rubb_pea : 646.0) RuBisCO large subunit-binding... 0.04 Orthogroups_2024-Update
Mp1g21640.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.02 Orthogroups_2024-Update
PSME_00013351-RA No alias (p08927|rubb_pea : 701.0) RuBisCO large subunit-binding... 0.03 Orthogroups_2024-Update
Potri.001G054400 No alias heat shock protein 60 0.03 Orthogroups_2024-Update
Potri.004G213400 No alias chaperonin-60alpha 0.04 Orthogroups_2024-Update
Pp1s149_289V6 No alias -like atpase 0.04 Orthogroups_2024-Update
Pp1s16_322V6 No alias rubisco subunit binding-protein alpha subunit 0.02 Orthogroups_2024-Update
Pp1s276_75V6 No alias ru large subunit-binding protein subunit beta 0.02 Orthogroups_2024-Update
Seita.3G283900.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
Seita.4G010900.1 No alias chaperone *(Hsp60) & subunit beta of Cpn60 chaperonin... 0.03 Orthogroups_2024-Update
Seita.9G231400.1 No alias chaperone *(Hsp60) 0.03 Orthogroups_2024-Update
Sobic.001G228200.1 No alias chaperone *(Hsp60) 0.04 Orthogroups_2024-Update
Sobic.009G098100.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.02 Orthogroups_2024-Update
Sobic.010G011200.1 No alias chaperone *(Hsp60) & subunit beta of CPN60 assembly... 0.04 Orthogroups_2024-Update
Sopen01g016850 No alias TCP-1/cpn60 chaperonin family 0.09 Orthogroups_2024-Update
Sopen03g039670 No alias TCP-1/cpn60 chaperonin family 0.05 Orthogroups_2024-Update
Sopen03g040450 No alias TCP-1/cpn60 chaperonin family 0.03 Orthogroups_2024-Update
Sopen09g034150 No alias TCP-1/cpn60 chaperonin family 0.04 Orthogroups_2024-Update
Sopen11g028490 No alias TCP-1/cpn60 chaperonin family 0.1 Orthogroups_2024-Update
evm.model.contig_4417.1 No alias (at2g28000 : 575.0) Encodes chaperonin-60 alpha, a... 0.02 Orthogroups_2024-Update
evm.model.contig_552.1 No alias (q05046|ch62_cucma : 684.0) Chaperonin CPN60-2,... 0.05 Orthogroups_2024-Update
evm.model.tig00001269.7 No alias (q05046|ch62_cucma : 728.0) Chaperonin CPN60-2,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003937 IMP cyclohydrolase activity IEP Predicted GO
MF GO:0004055 argininosuccinate synthase activity IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006525 arginine metabolic process IEP Predicted GO
BP GO:0006526 arginine biosynthetic process IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0019238 cyclohydrolase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 77 580
No external refs found!