Solyc03g120840

Description : ethylene-responsive transcription factor (AHRD V3.3 *-* AT5G07580.1)

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc03g120840
Cluster	HCCA clusters: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
A4A49_11348	No alias	ethylene-responsive transcription factor erf010	0.03	Orthogroups_2024-Update
A4A49_13998	No alias	ethylene-responsive transcription factor 4	0.03	Orthogroups_2024-Update
At1g01250	No alias	Ethylene-responsive transcription factor ERF023...	0.03	Orthogroups_2024-Update
Brara.A03039.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Brara.D01886.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Brara.G02403.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.J00058.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Cre16.g661650	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.02G236800	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
HORVU0Hr1G018240.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
HORVU0Hr1G030500.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
HORVU6Hr1G062940.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
LOC_Os01g58420	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
Potri.017G087800	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Potri.019G073300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Seita.1G248300.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Seita.3G281000.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G184700.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Sopen03g024430	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Predicted GO
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Predicted GO
MF	GO:0004222	metalloendopeptidase activity	IEP	Predicted GO
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	IEP	Predicted GO
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	Predicted GO
BP	GO:0009611	response to wounding	IEP	Predicted GO
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	Predicted GO
MF	GO:0016853	isomerase activity	IEP	Predicted GO
MF	GO:0016859	cis-trans isomerase activity	IEP	Predicted GO
MF	GO:0016866	intramolecular transferase activity	IEP	Predicted GO
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Predicted GO
BP	GO:0018208	peptidyl-proline modification	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	40	87

External Links

No external refs found!

Solyc03g120840

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation