Solyc03g122070

Description : ABC transporter B family-like protein (AHRD V3.3 *** G7L8C5_MEDTR)

Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc03g122070
Cluster	HCCA clusters: Cluster_33

Target	Alias	Description	ECC score	Gene Family Method
A4A49_01823	No alias	putative abc transporter b family member 8	0.02	Orthogroups_2024-Update
Brara.I01939.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
LOC_Os01g18670	No alias	MDR-like ABC transporter, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g40570	No alias	ABC transporter, ATP-binding protein, putative, expressed	0.02	Orthogroups_2024-Update
Mp2g02920.1	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.02	Orthogroups_2024-Update
PSME_00024064-RA	No alias	(at3g28345 : 1431.0) ABC transporter family protein;...	0.03	Orthogroups_2024-Update
Potri.001G165000	No alias	ATP binding cassette subfamily B19	0.03	Orthogroups_2024-Update
Potri.017G085000	No alias	ABC transporter family protein	0.03	Orthogroups_2024-Update
Potri.018G141400	No alias	ABC transporter family protein	0.03	Orthogroups_2024-Update
Pp1s338_12V6	No alias	multidrug pheromone mdr abc transporter family	0.03	Orthogroups_2024-Update
Pp1s38_321V6	No alias	multidrug pheromone mdr abc transporter family	0.02	Orthogroups_2024-Update
Sobic.003G180400.1	No alias	subfamily ABCB transporter	0.04	Orthogroups_2024-Update
Solyc02g087870	No alias	ABC transporter B family protein (AHRD V3.3 *** A0A072U6J8_MEDTR)	0.02	Orthogroups_2024-Update
Solyc06g009280	No alias	ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR)	0.04	Orthogroups_2024-Update
Sopen06g004030	No alias	ABC transporter transmembrane region	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008897	holo-[acyl-carrier-protein] synthase activity	IEP	Predicted GO
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	2	88
IPR003439	ABC_transporter-like	582	730
IPR011527	ABC1_TM_dom	241	512

External Links

No external refs found!

Solyc03g122070

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation