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  5. Solyc03g122340

Solyc03g122340


Description : lipoxygenase D


Gene families : OG_42_0000116 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000116_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g122340
Cluster HCCA clusters: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Glyma.07G034900 No alias lipoxygenase 1 0.02 Orthogroups_2024-Update
Glyma.07G196800 No alias lipoxygenase 3 0.03 Orthogroups_2024-Update
Glyma.13G347700 No alias lipoxygenase 1 0.04 Orthogroups_2024-Update
Mp8g09050.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.02 Orthogroups_2024-Update
Seita.4G215400.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.02 Orthogroups_2024-Update
Seita.9G127600.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update
Sopen09g030670 No alias Lipoxygenase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004659 prenyltransferase activity IEP Predicted GO
MF GO:0005351 carbohydrate:proton symporter activity IEP Predicted GO
MF GO:0005402 carbohydrate:cation symporter activity IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
MF GO:0008318 protein prenyltransferase activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0008643 carbohydrate transport IEP Predicted GO
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015293 symporter activity IEP Predicted GO
MF GO:0015294 solute:cation symporter activity IEP Predicted GO
MF GO:0015295 solute:proton symporter activity IEP Predicted GO
BP GO:0018342 protein prenylation IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
BP GO:0097354 prenylation IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR001024 PLAT/LH2_dom 126 211
IPR013819 LipOase_C 224 891
No external refs found!