1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g123830

Solyc03g123830


Description : D-3-phosphoglycerate dehydrogenase (AHRD V3.3 *** K4BN81_SOLLC)


Gene families : OG_42_0001120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001120_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g123830
Cluster HCCA clusters: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
Mp8g16970.1 No alias phosphoglycerate dehydrogenase 0.02 Orthogroups_2024-Update
PSME_00022324-RA No alias (at4g34200 : 781.0) embryo sac development arrest 9... 0.03 Orthogroups_2024-Update
Potri.001G300900 No alias D-3-phosphoglycerate dehydrogenase 0.03 Orthogroups_2024-Update
Potri.008G009500 No alias D-3-phosphoglycerate dehydrogenase 0.05 Orthogroups_2024-Update
Sopen03g041580 No alias D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0008152 metabolic process IEA InterProScan predictions
MF GO:0016597 amino acid binding IEA InterProScan predictions
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA InterProScan predictions
MF GO:0051287 NAD binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
InterPro domains Description Start Stop
IPR006140 D-isomer_DH_NAD-bd 190 365
IPR006139 D-isomer_2_OHA_DH_cat_dom 88 397
IPR002912 ACT_dom 558 614
No external refs found!