1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g005100

Solyc04g005100


Description : Myb-like transcription factor family protein (AHRD V3.3 *** A0A061E7E9_THECC)


Gene families : OG_42_0000088 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g005100
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
A4A49_28792 No alias transcription factor myb1r1 0.06 Orthogroups_2024-Update
A4A49_40987 No alias transcription factor myb1r1 0.02 Orthogroups_2024-Update
At1g19000 No alias AT1G19000 protein [Source:UniProtKB/TrEMBL;Acc:Q9LMC7] 0.02 Orthogroups_2024-Update
At1g70000 No alias At1g70000 [Source:UniProtKB/TrEMBL;Acc:O04544] 0.07 Orthogroups_2024-Update
At3g10590 No alias Duplicated homeodomain-like superfamily protein... 0.02 Orthogroups_2024-Update
At3g16350 No alias At3g16350 [Source:UniProtKB/TrEMBL;Acc:Q84TG2] 0.04 Orthogroups_2024-Update
At5g05790 No alias At5g05790 [Source:UniProtKB/TrEMBL;Acc:Q9FFJ9] 0.03 Orthogroups_2024-Update
Bradi2g23710 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g42870 No alias myb-like transcription factor family protein 0.06 Orthogroups_2024-Update
Bradi3g33400 No alias myb-like transcription factor family protein 0.03 Orthogroups_2024-Update
Brara.A01814.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Brara.C01111.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Brara.G02453.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Brara.I04759.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Brara.J02638.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Glyma.01G038600 No alias myb-like transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.02G026300 No alias myb-like transcription factor family protein 0.05 Orthogroups_2024-Update
Glyma.07G175500 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G290100 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G062200 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G019400 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.17G094400 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G134200 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G197500 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G019480.2 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
HORVU3Hr1G019840.4 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
HORVU3Hr1G052710.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.06 Orthogroups_2024-Update
LOC_Os01g64360 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g04840 No alias MYB family transcription factor, putative, expressed 0.05 Orthogroups_2024-Update
MA_908g0010 No alias (at2g38090 : 228.0) Duplicated homeodomain-like... 0.03 Orthogroups_2024-Update
PSME_00026612-RA No alias (at5g47390 : 221.0) myb-like transcription factor family... 0.04 Orthogroups_2024-Update
Potri.005G087700 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G191800 No alias myb-like transcription factor family protein 0.03 Orthogroups_2024-Update
Potri.012G060300 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s66_87V6 No alias dna binding 0.02 Orthogroups_2024-Update
Seita.3G111800.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Seita.3G124200.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Seita.5G216800.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Seita.5G385300.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Seita.6G065500.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Seita.9G319600.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Seita.9G321800.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Sobic.001G295600.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Sobic.001G297500.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Sobic.003G211200.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Sobic.007G037100.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Solyc08g078340 No alias MYB transcription factor (AHRD V3.3 *** T2DNE9_PHAVU) 0.03 Orthogroups_2024-Update
Sopen04g001120 No alias Myb-like DNA-binding domain 0.13 Orthogroups_2024-Update
Sopen06g027540 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen12g003730 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen12g023090 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 88 132
No external refs found!