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  5. Solyc04g005130

Solyc04g005130


Description : bHLH transcription factor 027


Gene families : OG_42_0000125 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g005130
Cluster HCCA clusters: Cluster_293

Target Alias Description ECC score Gene Family Method Actions
A4A49_20906 No alias transcription factor bhlh79 0.03 Orthogroups_2024-Update
Bradi3g38890 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g41510 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g32934 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Brara.F00690.1 No alias regulatory protein (CIB) of blue light perception &... 0.04 Orthogroups_2024-Update
GRMZM2G145579 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G199900 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G052870.15 No alias regulatory protein (CIB) of blue light perception &... 0.03 Orthogroups_2024-Update
PSME_00017682-RA No alias (at1g68920 : 172.0) basic helix-loop-helix (bHLH)... 0.03 Orthogroups_2024-Update
Potri.015G104200 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G051100 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Sopen04g031080 No alias Helix-loop-helix DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 110 157
No external refs found!