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  5. Solyc04g005390

Solyc04g005390


Description : Leucine-rich repeat-containing protein (AHRD V3.3 *** A0A103YAE5_CYNCS)


Gene families : OG_42_0002372 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002372_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g005390
Cluster HCCA clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Glyma.08G246100 No alias receptor-like protein kinase 2 0.04 Orthogroups_2024-Update
Seita.2G002700.1 No alias LRR-XV protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005758 mitochondrial intermembrane space IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0016530 metallochaperone activity IEP Predicted GO
MF GO:0016531 copper chaperone activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
CC GO:0031970 organelle envelope lumen IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 451 645
IPR013210 LRR_N_plant-typ 38 75
IPR001611 Leu-rich_rpt 181 238
IPR001611 Leu-rich_rpt 156 178
No external refs found!